About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_034738-T1AEROLYSIN-LIKE PROTEIN-RELATED
OS493_034739-T1SI:DKEY-19B23.11-RELATED
OS493_034740-T1ANKYRIN REPEAT PROTEIN
OS493_034741-T1
OS493_034742-T1UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER
OS493_034743-T1UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER
OS493_034744-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_034745-T1
OS493_034746-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_034747-T1
OS493_034748-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_034749-T1
OS493_034750-T1
OS493_034751-T1NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
OS493_034752-T1NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
OS493_034753-T1NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
OS493_034754-T1
OS493_034755-T1
OS493_034756-T1
OS493_034757-T1
OS493_034758-T1
OS493_034759-T1
OS493_034760-T1
OS493_034762-T1NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
OS493_034763-T1
OS493_034764-T1
OS493_034765-T1
OS493_034766-T1
OS493_034767-T1
OS493_034769-T1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
OS493_034770-T1ADENOSINE/GUANOSINE DIPHOSPHATASE
OS493_034771-T1
OS493_034772-T1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
OS493_034773-T1DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
OS493_034774-T1FACIOGENITAL DYSPLASIA PROTEIN
OS493_034775-T1
OS493_034776-T1ADENOSINE/GUANOSINE DIPHOSPHATASE
OS493_034777-T1HELICASE WITH DEATH DOMAIN-RELATED
OS493_034779-T1CYSTEINE-RICH PDF MOTIF DOMAIN-CONTAINING PROTEIN 1
OS493_034780-T11-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE
OS493_034782-T1FANCONI ANEMIA GROUP D2 PROTEIN
OS493_034783-T1FANCONI ANEMIA GROUP D2 PROTEIN
OS493_034784-T1COILED-COIL DOMAIN CONTAINING PROTEIN 9
OS493_034785-T1GLUTAREDOXIN 2
OS493_034786-T1GLUTAREDOXIN 2
OS493_034788-T1
OS493_034789-T1
OS493_034790-T1
OS493_034791-T1
OS493_034792-T1
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