About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_034688-T1
OS493_034689-T1CENTAURIN-GAMMA-1A
OS493_034690-T1
OS493_034691-T1
OS493_034692-T1ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN
OS493_034693-T1N-ACETYLTRANSFERASE 9
OS493_034694-T1UNCHARACTERIZED
OS493_034695-T1MULTICOPPER OXIDASE-RELATED
OS493_034696-T1
OS493_034697-T1
OS493_034698-T1-
OS493_034699-T1
OS493_034700-T1
OS493_034701-T1
OS493_034702-T1
OS493_034703-T1
OS493_034704-T1FAS-BINDING FACTOR 1
OS493_034705-T1THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAINING
OS493_034706-T1ACTIN
OS493_034707-T1
OS493_034708-T1MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
OS493_034709-T1
OS493_034710-T1MOLTING PROTEIN MLT-4
OS493_034711-T1AMMONIUM TRANSPORTER
OS493_034712-T1AMMONIUM TRANSPORTER MEP2
OS493_034713-T1
OS493_034714-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
OS493_034715-T1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
OS493_034716-T1
OS493_034717-T1RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG
OS493_034718-T1
OS493_034719-T1DUF614 FAMILY PROTEIN-RELATED
OS493_034720-T1DUF614 FAMILY PROTEIN-RELATED
OS493_034721-T1
OS493_034722-T1ARMADILLO REPEAT-CONTAINING PROTEIN 7
OS493_034723-T1-
OS493_034724-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
OS493_034725-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
OS493_034726-T1PROTEIN HEATR9
OS493_034727-T1PROTEIN HEATR9
OS493_034728-T1ACTIN
OS493_034729-T1ACTIN
OS493_034730-T1ACTIN
OS493_034731-T1NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
OS493_034732-T1UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER
OS493_034733-T1UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER
OS493_034734-T1AEROLYSIN-LIKE PROTEIN-RELATED
OS493_034735-T1
OS493_034736-T1AEROLYSIN-LIKE PROTEIN-RELATED
OS493_034737-T1AEROLYSIN-LIKE PROTEIN-RELATED
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