About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 651 652 653 654 655 656 657 658 659 660 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_035476-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
OS493_035477-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
OS493_035478-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
OS493_035479-T1
OS493_035480-T1UNCHARACTERIZED
OS493_035482-T1
OS493_035483-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
OS493_035484-T1MITOGEN-ACTIVATED PROTEIN KINASE
OS493_035485-T1UNCHARACTERIZED
OS493_035486-T1ZINC/IRON TRANSPORTER
OS493_035487-T1BCL-2 RELATED
OS493_035488-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_035489-T1MITOCHONDRIAL RIBOSOMAL PROTEIN L24
OS493_035490-T1
OS493_035491-T1ARGININE/SERINE RICH SPLICING FACTOR SF4/14
OS493_035492-T1SUPERKILLER 3 PROTEIN-RELATED
OS493_035493-T1SUPERKILLER 3 PROTEIN-RELATED
OS493_035494-T1
OS493_035495-T1SUPERKILLER 3 PROTEIN-RELATED
OS493_035496-T1
OS493_035497-T1CD59 GLYCOPROTEIN
OS493_035498-T1
OS493_035499-T1SUPERKILLER 3 PROTEIN-RELATED
OS493_035500-T1SUPERKILLER 3 PROTEIN-RELATED
OS493_035501-T1SUPERKILLER 3 PROTEIN-RELATED
OS493_035502-T1SUPERKILLER 3 PROTEIN-RELATED
OS493_035503-T1PROTEIN CBG23806
OS493_035504-T1SERINE INCORPORATOR
OS493_035505-T1HEDGEHOG
OS493_035506-T1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT
OS493_035507-T1UNCHARACTERIZED
OS493_035508-T1UNCHARACTERIZED
OS493_035509-T1
OS493_035510-T1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
OS493_035511-T1TUMOR PROTEIN D52
OS493_035512-T1
OS493_035513-T1EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN
OS493_035514-T1EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN
OS493_035515-T139S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL
OS493_035516-T1SERINE/THREONINE-PROTEIN KINASE DOA-RELATED
OS493_035517-T1
OS493_035518-T1MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2
OS493_035519-T1
OS493_035520-T1SYNTROPHIN
OS493_035521-T1SYNTROPHIN
OS493_035522-T1TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3
OS493_035523-T1AMINO ACID TRANSPORTER
OS493_035524-T1
OS493_035525-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_035526-T1
TOP