About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_035637-T1
OS493_035638-T1
OS493_035639-T1
OS493_035640-T1
OS493_035641-T1
OS493_035642-T1
OS493_035643-T1PROTEIN KINASE C, MU
OS493_035644-T1
OS493_035645-T1
OS493_035646-T1
OS493_035647-T1
OS493_035648-T1
OS493_035649-T1
OS493_035650-T1
OS493_035651-T1
OS493_035652-T1
OS493_035653-T1
OS493_035654-T1
OS493_035655-T1
OS493_035656-T1
OS493_035657-T1
OS493_035658-T1
OS493_035659-T1
OS493_035660-T1
OS493_035661-T1
OS493_035662-T1
OS493_035663-T1
OS493_035664-T1
OS493_035665-T1
OS493_035667-T1
OS493_035668-T1
OS493_035669-T1
OS493_035670-T1
OS493_035672-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_035673-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_035674-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_035675-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_035676-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_035677-T1
OS493_035678-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_035679-T1
OS493_035680-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_035681-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_035682-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_035683-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_035684-T1
OS493_035685-T1
OS493_035687-T1
OS493_035688-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_035689-T1
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