About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_034094-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_034095-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_034096-T1
OS493_034097-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_034098-T1CENTROMERE PROTEIN P
OS493_034099-T1HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
OS493_034100-T1
OS493_034101-T1HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
OS493_034102-T1HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
OS493_034103-T1NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT
OS493_034104-T1LIPID PHOSPHATE PHOSPHATASE
OS493_034105-T1
OS493_034106-T1UNCHARACTERIZED
OS493_034107-T1
OS493_034108-T1SPHINGOMYELIN PHOSPHODIESTERASE
OS493_034109-T1
OS493_034110-T1INTELECTIN
OS493_034111-T1SPHINGOMYELIN PHOSPHODIESTERASE
OS493_034112-T1SPHINGOMYELIN PHOSPHODIESTERASE
OS493_034113-T1ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER
OS493_034114-T1
OS493_034115-T1PROTEIN FAM183B
OS493_034116-T1
OS493_034117-T1DIAMINE N-ACETYLTRANSFERASE
OS493_034118-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_034119-T1
OS493_034120-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_034121-T1SMALL INTEGRAL MEMBRANE PROTEIN 7
OS493_034122-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_034123-T1
OS493_034124-T1GUANYLYL CYCLASE
OS493_034125-T1KPL2-RELATED
OS493_034126-T1GLUTAMINE SYNTHETASE
OS493_034127-T1RE40534P-RELATED
OS493_034128-T1RE40534P-RELATED
OS493_034129-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
OS493_034130-T1HOMEOBOX PROTEIN ARISTALESS
OS493_034131-T1CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
OS493_034132-T1ANKYRIN REPEAT FAMILY PROTEIN
OS493_034133-T1MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
OS493_034134-T1PROTEIN FLATTOP
OS493_034135-T1
OS493_034136-T1UNCHARACTERIZED
OS493_034137-T1
OS493_034138-T1
OS493_034139-T1
OS493_034140-T1
OS493_034141-T1
OS493_034142-T1GABA-B RECEPTOR
OS493_034143-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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