About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_65231-0.19
Bpl_scaf_65231-0.20METHYLTRANSFERASE-LIKE PROTEIN 24
Bpl_scaf_65236-0.29ANKYRIN REPEAT-CONTAINING
Bpl_scaf_65259-0.0
Bpl_scaf_65259-0.20
Bpl_scaf_65259-0.21
Bpl_scaf_65259-0.22
Bpl_scaf_65266-0.10CEREBELLIN-RELATED
Bpl_scaf_65266-0.4
Bpl_scaf_65266-0.5CEREBELLIN-RELATED
Bpl_scaf_65266-0.8
Bpl_scaf_65266-0.9CEREBELLIN-RELATED
Bpl_scaf_65270-0.11COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_65270-0.12COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_65279-0.15MOLTING PROTEIN MLT-4
Bpl_scaf_65279-0.16ANKYRIN REPEAT-CONTAINING
Bpl_scaf_65279-0.17EPITHELIAL MEMBRANE PROTEIN-RELATED
Bpl_scaf_65279-0.5LD33804P
Bpl_scaf_65283-0.3
Bpl_scaf_65283-0.4BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_65293-0.14
Bpl_scaf_65293-0.15
Bpl_scaf_65293-0.18IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65293-0.19NECTIN-RELATED
Bpl_scaf_65303-0.4SCAVENGER RECEPTOR CLASS F
Bpl_scaf_65303-0.5
Bpl_scaf_65312-0.0
Bpl_scaf_65319-0.7SPORE COAT PROTEIN SP85
Bpl_scaf_65319-0.9AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Bpl_scaf_65320-0.18DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65320-0.3PROTEIN SIDEKICK
Bpl_scaf_65320-1.8
Bpl_scaf_65320-1.9
Bpl_scaf_65320-3.14TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN
Bpl_scaf_65320-3.5ACYL-COA SYNTHETASE
Bpl_scaf_65320-4.4
Bpl_scaf_65320-5.4
Bpl_scaf_65320-6.2PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65320-6.3
Bpl_scaf_65320-6.8CHROMOBOX PROTEIN HOMOLOG 7
Bpl_scaf_6533-0.11IMPORTIN BETA
Bpl_scaf_6533-0.145'->3' EXORIBONUCLEASE
Bpl_scaf_6533-0.7UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
Bpl_scaf_65338-0.15TYROSINE-PROTEIN KINASE
Bpl_scaf_65370-0.12
Bpl_scaf_65370-0.15
Bpl_scaf_65370-0.17
Bpl_scaf_65377-0.12
Bpl_scaf_65377-0.18
Bpl_scaf_65377-0.19
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