About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_65519-1.18
Bpl_scaf_65519-1.19
Bpl_scaf_65519-1.21
Bpl_scaf_65519-1.23
Bpl_scaf_65520-0.7
Bpl_scaf_65520-1.6
Bpl_scaf_65520-2.20PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_65520-2.29
Bpl_scaf_65520-2.30EXPERIMENTAL AUTOIMMUNE PROSTATITIS ANTIGEN 2-RELATED
Bpl_scaf_65520-2.32
Bpl_scaf_65520-2.33-
Bpl_scaf_65520-2.7
Bpl_scaf_65520-3.6EXPERIMENTAL AUTOIMMUNE PROSTATITIS ANTIGEN 2-RELATED
Bpl_scaf_65520-3.7
Bpl_scaf_65520-3.9SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_65520-5.6CYTOKINE RECEPTOR
Bpl_scaf_65520-6.5
Bpl_scaf_65520-7.10ATP-DEPENDENT DNA HELICASE
Bpl_scaf_65520-7.12
Bpl_scaf_65520-7.13
Bpl_scaf_65520-7.14
Bpl_scaf_65520-7.3
Bpl_scaf_65520-8.10
Bpl_scaf_65520-8.14
Bpl_scaf_65520-8.20PUTATIVE-RELATED
Bpl_scaf_65520-8.8
Bpl_scaf_65525-0.2
Bpl_scaf_65525-1.13DI-N-ACETYLCHITOBIASE
Bpl_scaf_65525-1.14DNA-BINDING PROTEIN INHIBITOR
Bpl_scaf_65525-1.15CRYPTOCHROME
Bpl_scaf_65525-1.17RIBOSOMAL PROTEIN S9
Bpl_scaf_65525-1.22PHENYLALANYL-TRNA SYNTHETASE
Bpl_scaf_65543-0.10
Bpl_scaf_65543-0.14DTDP-4-DEHYDRORHAMNOSE REDUCTASE
Bpl_scaf_65543-0.3ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1
Bpl_scaf_65543-1.7
Bpl_scaf_65543-2.19
Bpl_scaf_65549-0.17
Bpl_scaf_65549-0.18
Bpl_scaf_65549-0.19
Bpl_scaf_65549-1.12
Bpl_scaf_65549-1.13FORKHEAD BOX PROTEIN J2 FAMILY MEMBER
Bpl_scaf_65549-2.13ALKALINE PHOSPHATASE
Bpl_scaf_65549-2.23
Bpl_scaf_65549-2.24
Bpl_scaf_65549-2.9
Bpl_scaf_65556-0.2
Bpl_scaf_65556-0.6ADHESION G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_65556-1.6TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_65556-1.7RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED
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