About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_65436-5.4MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Bpl_scaf_65436-5.6
Bpl_scaf_65436-6.18
Bpl_scaf_65436-6.21PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_65436-6.22
Bpl_scaf_65436-6.33TYROSINASE FAMILY MEMBER
Bpl_scaf_65436-6.34PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_65436-6.37
Bpl_scaf_65442-0.1
Bpl_scaf_65442-0.21CEREBELLIN-RELATED
Bpl_scaf_65442-0.22CEREBELLIN-RELATED
Bpl_scaf_65442-0.28CEREBELLIN-RELATED
Bpl_scaf_65442-0.35
Bpl_scaf_65442-0.37CEREBELLIN-RELATED
Bpl_scaf_65442-0.39CEREBELLIN-RELATED
Bpl_scaf_65442-0.41LITHOSTATHINE
Bpl_scaf_65442-0.8CEREBELLIN-RELATED
Bpl_scaf_65452-0.10
Bpl_scaf_65452-0.12NG5
Bpl_scaf_65462-0.0
Bpl_scaf_65462-0.1UNCHARACTERIZED
Bpl_scaf_65462-0.5PROTEIN FAM72A-RELATED
Bpl_scaf_65462-1.2PLEXIN
Bpl_scaf_65462-1.5PLEXIN
Bpl_scaf_65462-1.9PLEXIN
Bpl_scaf_65470-0.4L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_65470-0.6
Bpl_scaf_65470-1.3METHYLTRANSFERASE, FKBM FAMILY PROTEIN
Bpl_scaf_65470-1.6
Bpl_scaf_65476-0.2HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_65476-0.7
Bpl_scaf_65476-1.0
Bpl_scaf_65476-1.11
Bpl_scaf_65476-1.2
Bpl_scaf_65476-1.4SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Bpl_scaf_65490-0.0
Bpl_scaf_65490-1.0
Bpl_scaf_65490-1.6SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65502-0.1
Bpl_scaf_65504-0.4FI19480P1
Bpl_scaf_65504-0.6
Bpl_scaf_65504-1.10TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3
Bpl_scaf_65504-1.11RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
Bpl_scaf_65504-1.15PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_65504-1.22PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED
Bpl_scaf_65519-0.10EXPRESSED PROTEIN
Bpl_scaf_65519-0.14
Bpl_scaf_65519-0.4
Bpl_scaf_65519-0.9
Bpl_scaf_65519-1.14
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