About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_64988-3.22
Bpl_scaf_6499-0.0
Bpl_scaf_6499-0.6
Bpl_scaf_64990-0.0SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_64991-0.0UNCHARACTERIZED
Bpl_scaf_64991-0.2AGAP001331-PA-RELATED
Bpl_scaf_64992-0.0
Bpl_scaf_64993-0.1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_64994-0.4ASPARTYL/LYSYL-TRNA SYNTHETASE
Bpl_scaf_64995-0.0CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_64998-0.5
Bpl_scaf_64998-0.6
Bpl_scaf_64998-1.3SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_64998-2.13ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Bpl_scaf_64998-2.14RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG
Bpl_scaf_64998-2.15UNCHARACTERIZED
Bpl_scaf_64998-2.19
Bpl_scaf_64998-3.11SULFOTRANSFERASE SULT
Bpl_scaf_64998-3.14WD-40 REPEAT PROTEIN
Bpl_scaf_64998-3.16DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_64998-3.192-5 OLIGOADENYLATE SYNTHETASE
Bpl_scaf_64998-3.20ZINC FINGERS AND HOMEOBOXES PROTEIN 1, ISOFORM 2
Bpl_scaf_64998-3.23DISKS LARGE HOMOLOG 5
Bpl_scaf_64998-3.28WD-40 REPEAT PROTEIN
Bpl_scaf_64998-3.30ORF PROTEIN
Bpl_scaf_65004-0.4
Bpl_scaf_65018-0.0
Bpl_scaf_65018-0.8
Bpl_scaf_6502-0.3PX DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65032-0.1
Bpl_scaf_65056-0.0THAP DOMAIN PROTEIN
Bpl_scaf_65056-0.1EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65071-0.0
Bpl_scaf_65071-0.1
Bpl_scaf_6512-0.2
Bpl_scaf_65120-0.4
Bpl_scaf_65125-0.0
Bpl_scaf_65125-0.4ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65125-0.7PROTEIN TORNADO 1
Bpl_scaf_65125-0.8
Bpl_scaf_65135-0.1
Bpl_scaf_65135-0.3
Bpl_scaf_65144-0.1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65152-0.0
Bpl_scaf_65170-0.0
Bpl_scaf_65170-0.2
Bpl_scaf_65170-0.3
Bpl_scaf_65171-0.10
Bpl_scaf_65171-0.12
Bpl_scaf_65171-0.8
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