About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_65171-1.0
Bpl_scaf_65171-1.14ZGC:174356
Bpl_scaf_65171-1.2
Bpl_scaf_65171-1.9ATP-DEPENDENT DNA HELICASE
Bpl_scaf_65171-3.0HOMEOBOX PROTEIN ARISTALESS
Bpl_scaf_65171-4.11
Bpl_scaf_65171-4.13SERINE/ARGININE RICH SPLICING FACTOR
Bpl_scaf_65172-0.7
Bpl_scaf_65181-0.8
Bpl_scaf_65181-0.9ALCOHOL DEHYDROGENASE
Bpl_scaf_65186-0.15CYTOKINE RECEPTOR
Bpl_scaf_65198-0.6FORKHEAD BOX PROTEIN
Bpl_scaf_65198-0.7MICROCEPHALIN
Bpl_scaf_65198-0.8MICROCEPHALIN
Bpl_scaf_65198-0.9POTE ANKYRIN DOMAIN
Bpl_scaf_65208-0.7FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_65211-0.1
Bpl_scaf_6522-1.3UNCHARACTERIZED
Bpl_scaf_6522-3.12
Bpl_scaf_6522-3.17
Bpl_scaf_6522-3.18CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8
Bpl_scaf_6522-3.19CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19
Bpl_scaf_6522-3.9
Bpl_scaf_6522-4.10
Bpl_scaf_6522-4.11
Bpl_scaf_6522-4.12
Bpl_scaf_6522-4.13
Bpl_scaf_6522-4.14CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8
Bpl_scaf_6522-5.0
Bpl_scaf_6522-5.4
Bpl_scaf_6522-6.4TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_6522-6.8
Bpl_scaf_65220-0.0APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65221-0.5
Bpl_scaf_65221-1.14AD-003 - RELATED
Bpl_scaf_65221-1.28KINESIN-ASSOCIATED PROTEINS
Bpl_scaf_65221-1.29PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Bpl_scaf_65221-1.30FOLLISTATIN-RELATED
Bpl_scaf_65221-2.11REGULATOR-RELATED
Bpl_scaf_65221-2.12
Bpl_scaf_65221-3.16KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Bpl_scaf_65221-3.27
Bpl_scaf_65221-3.29UPF0315 PROTEIN-RELATED
Bpl_scaf_65221-3.30PROPERDIN
Bpl_scaf_65221-3.31PROPERDIN
Bpl_scaf_65221-4.11
Bpl_scaf_65221-4.5ELONGATION FACTOR TU-RELATED
Bpl_scaf_65221-5.203'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_65221-5.21
Bpl_scaf_65231-0.16
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