About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_64849-1.7
Bpl_scaf_6485-0.0
Bpl_scaf_6485-0.1
Bpl_scaf_6485-0.3
Bpl_scaf_64858-0.0
Bpl_scaf_64858-0.2
Bpl_scaf_64858-0.4
Bpl_scaf_64858-1.19
Bpl_scaf_64858-1.22
Bpl_scaf_64858-1.23CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_64871-0.4
Bpl_scaf_64871-1.7B-BOX DOMAIN CONTAINING
Bpl_scaf_64871-2.4GUANYLYL CYCLASE
Bpl_scaf_64871-2.8PROPERDIN
Bpl_scaf_64881-0.11
Bpl_scaf_64881-0.18
Bpl_scaf_64881-0.19INHIBITOR OF APOPTOSIS
Bpl_scaf_64881-0.7
Bpl_scaf_64881-1.10INHIBITOR OF APOPTOSIS
Bpl_scaf_64881-1.15
Bpl_scaf_64881-1.20INHIBITOR OF APOPTOSIS
Bpl_scaf_64881-1.21BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1
Bpl_scaf_64881-2.10TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Bpl_scaf_64881-2.15INHIBITOR OF APOPTOSIS
Bpl_scaf_64881-2.16INHIBITOR OF APOPTOSIS
Bpl_scaf_64881-2.17INHIBITOR OF APOPTOSIS
Bpl_scaf_64881-2.24
Bpl_scaf_64881-2.27INHIBITOR OF APOPTOSIS
Bpl_scaf_64883-0.0CEREBELLIN-RELATED
Bpl_scaf_64890-0.19RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_64890-1.10
Bpl_scaf_64890-1.11SOLUTE CARRIER FAMILY 17
Bpl_scaf_64890-1.17EXPRESSED PROTEIN
Bpl_scaf_64890-2.14DYNEIN INTERMEDIATE CHAIN
Bpl_scaf_64890-2.15METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
Bpl_scaf_64890-2.22THIOESTERASE SUPERFAMILY MEMBER-RELATED
Bpl_scaf_64890-2.24
Bpl_scaf_64892-0.3
Bpl_scaf_6490-0.0HEME TRANSPORTER HRG1
Bpl_scaf_6490-0.5ADHESION G PROTEIN-COUPLED RECEPTOR G7
Bpl_scaf_64903-0.0-
Bpl_scaf_64903-0.5
Bpl_scaf_64903-1.6
Bpl_scaf_64903-1.7OPSIN
Bpl_scaf_64903-1.9OPSIN
Bpl_scaf_64903-2.8
Bpl_scaf_64904-2.0FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_64904-3.24
Bpl_scaf_64904-3.6SERINE PROTEASE INHIBITOR, SERPIN
Bpl_scaf_64904-3.8SERINE PROTEASE INHIBITOR, SERPIN
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