About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_64300-3.5PORCUPINE
Bpl_scaf_64300-3.6CARBOHYDRATE SULFOTRANSFERASE 15
Bpl_scaf_64302-0.0
Bpl_scaf_64304-0.0
Bpl_scaf_64305-0.0PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_64310-0.10DREV PROTEIN
Bpl_scaf_64310-0.6
Bpl_scaf_64310-1.2THIAMINE-TRIPHOSPHATASE
Bpl_scaf_64310-3.1
Bpl_scaf_64310-3.3ZINC FINGER HOMEOBOX PROTEIN
Bpl_scaf_64310-3.7
Bpl_scaf_64310-3.8ZINC FINGER HOMEOBOX PROTEIN
Bpl_scaf_64314-0.0HISTONE H2B
Bpl_scaf_64315-0.0UNCHARACTERIZED
Bpl_scaf_64315-0.4CHITINASE
Bpl_scaf_64316-0.1
Bpl_scaf_64317-0.1TETRASPANIN
Bpl_scaf_64318-0.1
Bpl_scaf_64320-0.3
Bpl_scaf_64320-1.1
Bpl_scaf_64320-1.6ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Bpl_scaf_64320-2.0D-DOPACHROME DECARBOXYLASE
Bpl_scaf_64320-2.12
Bpl_scaf_64320-2.7
Bpl_scaf_64320-3.10
Bpl_scaf_64320-3.3
Bpl_scaf_64320-3.9
Bpl_scaf_64321-0.1CYTOCHROME P450 FAMILY 4
Bpl_scaf_64323-0.5IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_64323-0.6IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_64327-0.3
Bpl_scaf_64330-0.14IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_64330-0.15
Bpl_scaf_64330-0.21
Bpl_scaf_64330-1.7
Bpl_scaf_64330-2.10
Bpl_scaf_64330-2.5
Bpl_scaf_64330-2.7
Bpl_scaf_64330-3.18COLLAGEN ALPHA
Bpl_scaf_64330-3.20
Bpl_scaf_64330-3.21
Bpl_scaf_64331-0.2
Bpl_scaf_64335-0.5AGAP001331-PA-RELATED
Bpl_scaf_64336-0.1
Bpl_scaf_64337-0.5FATTY ACID SYNTHASE
Bpl_scaf_64339-0.3
Bpl_scaf_64340-0.2CALRETICULIN AND CALNEXIN
Bpl_scaf_64340-1.7RIBONUCLEASE
Bpl_scaf_64340-1.9TRANSMEMBRANE PROTEIN 59-LIKE PROTEIN
Bpl_scaf_64340-3.5CYTOCHROME P450 FAMILY 7
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