About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_63868-0.13
Bpl_scaf_63876-0.10
Bpl_scaf_63876-0.12
Bpl_scaf_63876-0.13
Bpl_scaf_63880-0.2
Bpl_scaf_63880-0.5TOLL-LIKE RECEPTOR
Bpl_scaf_63880-0.6TOLL-LIKE RECEPTOR
Bpl_scaf_63888-0.1160 KDA RIBONUCLEOPROTEIN SSA/RO
Bpl_scaf_63888-0.13CONTACTIN 5
Bpl_scaf_63888-0.8
Bpl_scaf_63894-0.2TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_63903-0.10
Bpl_scaf_63903-0.11TETRASPANIN
Bpl_scaf_63903-0.9
Bpl_scaf_63915-0.10
Bpl_scaf_63915-0.8F20B24.22
Bpl_scaf_63915-0.9
Bpl_scaf_63926-0.11
Bpl_scaf_63926-0.5
Bpl_scaf_63926-0.9
Bpl_scaf_63943-0.5
Bpl_scaf_63944-1.1
Bpl_scaf_63944-1.2
Bpl_scaf_63944-3.0NEUROPEPTIDES RECEPTOR
Bpl_scaf_63944-3.6SET DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_63944-4.0NEUROPEPTIDES RECEPTOR
Bpl_scaf_63944-5.15LEUCYL-TRNA SYNTHETASE
Bpl_scaf_63944-5.16NAD(P) TRANSHYDROGENASE
Bpl_scaf_63944-5.17GAMMA TUBULIN COMPLEX PROTEIN
Bpl_scaf_63944-5.25
Bpl_scaf_63944-5.3
Bpl_scaf_6395-0.8
Bpl_scaf_6395-0.9
Bpl_scaf_63952-0.4PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Bpl_scaf_63952-0.5PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Bpl_scaf_63978-0.6CTP SYNTHASE
Bpl_scaf_63978-0.7CTP SYNTHASE
Bpl_scaf_63997-0.1INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_640-0.7
Bpl_scaf_64005-0.10
Bpl_scaf_64005-0.14PROPERDIN
Bpl_scaf_64005-1.14
Bpl_scaf_64005-1.7
Bpl_scaf_64005-10.9TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_64005-13.12LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Bpl_scaf_64005-14.6OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Bpl_scaf_64005-14.7ZGC:162816-RELATED
Bpl_scaf_64005-15.5ACTIN
Bpl_scaf_64005-2.12HOMEOBOX PROTEIN, PUTATIVE-RELATED
Bpl_scaf_64005-2.13THREONINE-TRNA LIGASE
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