About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_6373-10.9WNT RELATED
Bpl_scaf_6373-12.1MIP08469P
Bpl_scaf_6373-12.3MIP08469P
Bpl_scaf_6373-12.4MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
Bpl_scaf_6373-13.10PROTEIN NEDD1
Bpl_scaf_6373-13.12METHYL-CPG-BINDING PROTEIN
Bpl_scaf_6373-13.37MULTI-COPPER OXIDASE
Bpl_scaf_6373-13.38MULTI-COPPER OXIDASE
Bpl_scaf_6373-13.7MULTI-COPPER OXIDASE
Bpl_scaf_6373-2.1FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_6373-3.12CEREBELLIN-RELATED
Bpl_scaf_6373-3.26
Bpl_scaf_6373-3.5CEREBELLIN-RELATED
Bpl_scaf_6373-3.68CEREBELLIN-RELATED
Bpl_scaf_6373-3.69CEREBELLIN-RELATED
Bpl_scaf_6373-3.70CEREBELLIN-RELATED
Bpl_scaf_6373-3.71CEREBELLIN-RELATED
Bpl_scaf_6373-4.20PERIOSTIN-RELATED
Bpl_scaf_6373-4.21HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Bpl_scaf_6373-4.7
Bpl_scaf_6373-4.9COILED-COIL DOMAIN-CONTAINING PROTEIN 162
Bpl_scaf_6373-5.6CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA
Bpl_scaf_6373-5.7AMINOMETHYLTRANSFERASE
Bpl_scaf_6373-5.8COILED-COIL DOMAIN-CONTAINING PROTEIN 162
Bpl_scaf_6373-6.11INHIBITOR OF GROWTH PROTEIN
Bpl_scaf_6373-6.4ELONGATION FACTOR TU-RELATED
Bpl_scaf_6373-6.7ELONGATION FACTOR TU-RELATED
Bpl_scaf_6373-6.9SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Bpl_scaf_6373-7.5FACIOGENITAL DYSPLASIA PROTEIN
Bpl_scaf_6373-8.14DNA2/NAM7 HELICASE FAMILY
Bpl_scaf_6373-8.20CANCER/TESTIS ANTIGEN 55
Bpl_scaf_6373-8.22RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Bpl_scaf_6373-9.6UNCHARACTERIZED
Bpl_scaf_6373-9.8HISTONE DEACETYLASE HDAC1-RELATED
Bpl_scaf_63742-0.3BRYOPORIN
Bpl_scaf_63743-0.0BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Bpl_scaf_63743-0.4SMALL MEMBRANE PROTEIN-RELATED
Bpl_scaf_63743-0.5KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Bpl_scaf_63743-1.11SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN
Bpl_scaf_63743-1.16INHIBITOR OF APOPTOSIS
Bpl_scaf_63743-1.17INHIBITOR OF APOPTOSIS
Bpl_scaf_63743-2.3AROMATIC AMINO ACID HYDROXYLASE
Bpl_scaf_63743-3.10
Bpl_scaf_63743-3.12
Bpl_scaf_63743-3.14
Bpl_scaf_63743-3.6INHIBITOR OF APOPTOSIS
Bpl_scaf_63743-3.7
Bpl_scaf_63743-4.10RABIN3-RELATED
Bpl_scaf_63743-4.11INHIBITOR OF APOPTOSIS
Bpl_scaf_63743-4.12GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
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