About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_6407-0.0
Bpl_scaf_6407-0.2
Bpl_scaf_6407-0.7
Bpl_scaf_64074-0.20
Bpl_scaf_64074-0.24SET DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_64074-0.25
Bpl_scaf_64074-0.26
Bpl_scaf_64085-0.12
Bpl_scaf_64085-0.13
Bpl_scaf_64085-0.14
Bpl_scaf_64085-0.15ATP-DEPENDENT DNA HELICASE
Bpl_scaf_64104-0.0
Bpl_scaf_64104-0.11
Bpl_scaf_64117-0.0
Bpl_scaf_64117-1.12TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Bpl_scaf_64117-1.13POLY A POLYMERASE
Bpl_scaf_64117-1.14BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN
Bpl_scaf_64117-1.23
Bpl_scaf_64117-1.7GH11867P
Bpl_scaf_64124-0.3ACETYL-COA C-ACETYLTRANSFERASE
Bpl_scaf_64124-0.4MENORIN (DENDRITIC BRANCHING PROTEIN)
Bpl_scaf_64124-1.10
Bpl_scaf_64124-1.9UNCHARACTERIZED
Bpl_scaf_64134-0.10SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_64134-0.18
Bpl_scaf_64134-0.3
Bpl_scaf_64134-0.7PROTEIN CBG23764
Bpl_scaf_64134-1.13
Bpl_scaf_64134-1.14OS10G0105400 PROTEIN
Bpl_scaf_64134-1.8OS10G0105400 PROTEIN
Bpl_scaf_64135-1.3ANKYRIN REPEAT FAMILY A
Bpl_scaf_64135-1.4
Bpl_scaf_64136-2.18WD40 REPEAT DOMAIN 95
Bpl_scaf_64136-2.19E3 UBIQUITIN-PROTEIN LIGASE MYCBP2
Bpl_scaf_64136-2.20CALPONIN
Bpl_scaf_64136-3.19AGAP009604-PA
Bpl_scaf_64136-3.6ORGANIC SOLUTE TRANSPORTER-RELATED
Bpl_scaf_64136-3.8SPARTIN
Bpl_scaf_64136-5.2ETS
Bpl_scaf_64136-6.8
Bpl_scaf_64136-6.9
Bpl_scaf_64136-7.2EG:EG0003.4 PROTEIN-RELATED
Bpl_scaf_64136-7.3EG:EG0003.4 PROTEIN-RELATED
Bpl_scaf_64136-7.4CALCYPHOSIN
Bpl_scaf_64136-7.5
Bpl_scaf_64136-8.1INHIBITOR OF APOPTOSIS
Bpl_scaf_64136-8.10CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Bpl_scaf_64136-8.11INHIBITOR OF APOPTOSIS
Bpl_scaf_64136-8.7INHIBITOR OF APOPTOSIS
Bpl_scaf_64137-0.8O-ACYLTRANSFERASE
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