About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_64196-0.1
Bpl_scaf_64197-0.0
Bpl_scaf_64198-0.0
Bpl_scaf_64199-0.0
Bpl_scaf_64203-0.12CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_64203-0.13
Bpl_scaf_64203-0.8
Bpl_scaf_64203-1.1
Bpl_scaf_64203-2.10UNCHARACTERIZED
Bpl_scaf_64203-2.9JITTERBUG, ISOFORM N
Bpl_scaf_64205-0.0
Bpl_scaf_64207-0.2TETRASPANIN
Bpl_scaf_64209-0.8ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_64209-1.12LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_64209-1.13MOLTING PROTEIN MLT-4
Bpl_scaf_64209-2.0
Bpl_scaf_64217-0.2PYRROLINE-5-CARBOXYLATE REDUCTASE
Bpl_scaf_6422-0.11
Bpl_scaf_6422-0.3
Bpl_scaf_64220-0.16OXIDOREDUCTASE HTATIP2
Bpl_scaf_64220-0.25CYTOCHROME P450 FAMILY 3
Bpl_scaf_64220-1.9
Bpl_scaf_64220-2.10FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
Bpl_scaf_64220-2.11
Bpl_scaf_64220-2.14
Bpl_scaf_64220-2.8OXIDASE/PEROXIDASE
Bpl_scaf_64220-2.9FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
Bpl_scaf_64222-0.0
Bpl_scaf_64223-0.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_64225-0.0LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Bpl_scaf_64229-1.4PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
Bpl_scaf_64229-1.5PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Bpl_scaf_64229-1.6RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Bpl_scaf_64229-2.12
Bpl_scaf_64229-2.16SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Bpl_scaf_64229-2.25FORKHEAD BOX PROTEIN J1
Bpl_scaf_64229-2.7FORKHEAD BOX PROTEIN J1
Bpl_scaf_6429-0.1
Bpl_scaf_6429-0.3
Bpl_scaf_64300-0.0
Bpl_scaf_64300-0.4
Bpl_scaf_64300-0.5
Bpl_scaf_64300-0.7ANKYRIN REPEAT-CONTAINING
Bpl_scaf_64300-1.1CENTAURIN-GAMMA-1A
Bpl_scaf_64300-2.0
Bpl_scaf_64300-2.19NOTCH LIGAND FAMILY MEMBER
Bpl_scaf_64300-2.23COSTARS FAMILY PROTEIN ABRACL
Bpl_scaf_64300-2.24
Bpl_scaf_64300-2.25
Bpl_scaf_64300-2.27
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