About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_031119-T1CRUMBS FAMILY MEMBER
LLU|FUN_031120-T1
LLU|FUN_031121-T1PROTEIN CBG24663
LLU|FUN_031122-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_031123-T1
LLU|FUN_031124-T1
LLU|FUN_031125-T1
LLU|FUN_031126-T1
LLU|FUN_031127-T1
LLU|FUN_031128-T1
LLU|FUN_031129-T1
LLU|FUN_031130-T1PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED
LLU|FUN_031131-T1UNCHARACTERIZED
LLU|FUN_031132-T1PARVIN
LLU|FUN_031133-T1
LLU|FUN_031134-T1TRANSCRIPTIONAL ENHANCER FACTOR TEF RELATED
LLU|FUN_031135-T1GAMMA TUBULIN COMPLEX PROTEIN
LLU|FUN_031136-T1
LLU|FUN_031137-T1UNCHARACTERIZED
LLU|FUN_031138-T1SMALL ACIDIC PROTEIN-RELATED
LLU|FUN_031139-T160S RIBOSOMAL PROTEIN L36A/L44
LLU|FUN_031140-T1TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12
LLU|FUN_031141-T1NAD DEPENDENT EPIMERASE/DEHYDRATASE
LLU|FUN_031142-T1
LLU|FUN_031143-T1
LLU|FUN_031144-T1
LLU|FUN_031145-T1OS10G0105400 PROTEIN
LLU|FUN_031146-T1INOSITOL 5-PHOSPHATASE
LLU|FUN_031147-T1
LLU|FUN_031148-T1
LLU|FUN_031149-T1MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
LLU|FUN_031150-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_031151-T1NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
LLU|FUN_031152-T1
LLU|FUN_031153-T1CNH DOMAIN CONTAINING
LLU|FUN_031154-T1
LLU|FUN_031155-T1
LLU|FUN_031156-T1V-TYPE PROTON ATPASE SUBUNIT C
LLU|FUN_031157-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
LLU|FUN_031158-T1
LLU|FUN_031159-T1
LLU|FUN_031160-T1
LLU|FUN_031161-T1
LLU|FUN_031162-T1
LLU|FUN_031163-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
LLU|FUN_031164-T1PHOSPHOACETYLGLUCOSAMINE MUTASE
LLU|FUN_031165-T1BETA-1,4-GALACTOSYLTRANSFERASE
LLU|FUN_031166-T1BTB/POZ DOMAIN-CONTAINING PROTEIN 16
LLU|FUN_031167-T1
LLU|FUN_031168-T1ADENYLATE CYCLASE TYPE 1
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