About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_031269-T1
LLU|FUN_031270-T1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
LLU|FUN_031271-T1
LLU|FUN_031272-T1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
LLU|FUN_031273-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_031274-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_031275-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_031276-T1RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
LLU|FUN_031277-T1CALPAIN
LLU|FUN_031278-T1PROFILIN
LLU|FUN_031279-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_031280-T1
LLU|FUN_031281-T1
LLU|FUN_031282-T1
LLU|FUN_031283-T1
LLU|FUN_031284-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_031285-T1CELL CYCLE CONTROL PROTEIN CWF15
LLU|FUN_031286-T1GPALPP MOTIFS-CONTAINING PROTEIN 1
LLU|FUN_031287-T1-
LLU|FUN_031288-T1
LLU|FUN_031289-T1PHOX (PX) DOMAIN-CONTAINING PROTEIN
LLU|FUN_031290-T1
LLU|FUN_031291-T1
LLU|FUN_031292-T1E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
LLU|FUN_031293-T1
LLU|FUN_031294-T1
LLU|FUN_031295-T1
LLU|FUN_031296-T1
LLU|FUN_031297-T1
LLU|FUN_031298-T1
LLU|FUN_031299-T1
LLU|FUN_031300-T1RGD1565685 PROTEIN
LLU|FUN_031301-T1
LLU|FUN_031302-T1
LLU|FUN_031303-T1
LLU|FUN_031304-T1
LLU|FUN_031306-T1SNF5
LLU|FUN_031307-T1
LLU|FUN_031308-T1
LLU|FUN_031309-T1
LLU|FUN_031310-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_031311-T1TIGHT JUNCTION PROTEIN
LLU|FUN_031312-T1
LLU|FUN_031313-T1
LLU|FUN_031314-T1FLOTILLIN-RELATED
LLU|FUN_031315-T1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
LLU|FUN_031316-T1MALARIA ANTIGEN-RELATED
LLU|FUN_031317-T1MALARIA ANTIGEN-RELATED
LLU|FUN_031318-T1
LLU|FUN_031319-T1G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
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