About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_030966-T1
LLU|FUN_030967-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_030968-T1
LLU|FUN_030969-T1
LLU|FUN_030970-T1
LLU|FUN_030971-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_030972-T1
LLU|FUN_030973-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_030974-T1
LLU|FUN_030975-T1
LLU|FUN_030976-T1
LLU|FUN_030977-T1
LLU|FUN_030980-T1
LLU|FUN_030981-T1
LLU|FUN_030982-T1
LLU|FUN_030983-T1
LLU|FUN_030984-T1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
LLU|FUN_030985-T1HOMEOBOX PROTEIN ABDOMINAL-B
LLU|FUN_030986-T1X-BOX BINDING PROTEIN 1
LLU|FUN_030987-T1(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
LLU|FUN_030988-T1GLYCEROL-3-PHOSPHATE DEHYDROGENASE
LLU|FUN_030989-T1SKICH DOMAIN-CONTAINING PROTEIN
LLU|FUN_030990-T13-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
LLU|FUN_030991-T1MUCIN 4-RELATED
LLU|FUN_030992-T1
LLU|FUN_030993-T1MUCIN 4-RELATED
LLU|FUN_030994-T1PROLINE-RICH EXTENSIN-LIKE
LLU|FUN_030995-T1SOLUTE CARRIER FAMILY 39
LLU|FUN_030996-T1
LLU|FUN_030997-T1ZINC FINGER PROTEIN
LLU|FUN_030998-T1
LLU|FUN_030999-T1
LLU|FUN_031000-T1
LLU|FUN_031002-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
LLU|FUN_031003-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_031004-T1
LLU|FUN_031005-T1REGULATOR-RELATED
LLU|FUN_031006-T1UNCHARACTERIZED
LLU|FUN_031007-T1AROMATIC AMINO ACID HYDROXYLASE
LLU|FUN_031008-T1
LLU|FUN_031009-T1INTERFERON-INDUCIBLE GTPASE
LLU|FUN_031010-T1RING FINGER PROTEIN 17
LLU|FUN_031011-T1UNCHARACTERIZED
LLU|FUN_031012-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_031013-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_031014-T1UNCHARACTERIZED
LLU|FUN_031015-T1COLLAGEN ALPHA
LLU|FUN_031016-T1
LLU|FUN_031017-T1
LLU|FUN_031018-T1
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