About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_030762-T1BLR2807 PROTEIN
LLU|FUN_030763-T1
LLU|FUN_030764-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_030765-T1
LLU|FUN_030766-T1
LLU|FUN_030767-T1
LLU|FUN_030768-T1COLLAGEN ALPHA
LLU|FUN_030769-T1BACTERIOHEMERYTHRIN
LLU|FUN_030770-T1
LLU|FUN_030771-T1ACETYL-COA C-ACYLTRANSFERASE
LLU|FUN_030772-T1
LLU|FUN_030773-T1CALPONIN
LLU|FUN_030774-T1ANTIGEN BSP, PUTATIVE-RELATED
LLU|FUN_030775-T1
LLU|FUN_030776-T1HOMEO BOX HB9 LIKE A-RELATED
LLU|FUN_030777-T1UNCHARACTERIZED
LLU|FUN_030778-T1UNCHARACTERIZED
LLU|FUN_030779-T1
LLU|FUN_030780-T1UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG
LLU|FUN_030781-T1UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG
LLU|FUN_030782-T1
LLU|FUN_030783-T1
LLU|FUN_030784-T1
LLU|FUN_030785-T1
LLU|FUN_030786-T1
LLU|FUN_030787-T1
LLU|FUN_030788-T1
LLU|FUN_030789-T1
LLU|FUN_030790-T1
LLU|FUN_030791-T1
LLU|FUN_030792-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
LLU|FUN_030793-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
LLU|FUN_030794-T1
LLU|FUN_030795-T1
LLU|FUN_030796-T13-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN
LLU|FUN_030797-T1
LLU|FUN_030798-T1
LLU|FUN_030799-T1
LLU|FUN_030800-T1PHOSPHOLIPASE D
LLU|FUN_030801-T1ENDONUCLEASE-RELATED
LLU|FUN_030802-T1
LLU|FUN_030803-T1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_030804-T1
LLU|FUN_030805-T1
LLU|FUN_030806-T1
LLU|FUN_030807-T1
LLU|FUN_030808-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
LLU|FUN_030809-T1
LLU|FUN_030810-T1ARRESTIN
LLU|FUN_030811-T1OROTATE PHOSPHORIBOSYLTRANSFERASE
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