About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_030812-T1
LLU|FUN_030817-T1
LLU|FUN_030818-T1LIM DOMAIN-CONTAINING PROTEIN
LLU|FUN_030819-T1SODIUM/HYDROGEN EXCHANGER
LLU|FUN_030820-T1
LLU|FUN_030821-T1GLYCOGENIN SUBFAMILY MEMBER
LLU|FUN_030822-T1
LLU|FUN_030823-T1
LLU|FUN_030824-T1
LLU|FUN_030825-T1
LLU|FUN_030826-T1
LLU|FUN_030827-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_030828-T1
LLU|FUN_030829-T1
LLU|FUN_030830-T1LEISHMANOLYSIN-LIKE PEPTIDASE
LLU|FUN_030831-T1
LLU|FUN_030832-T1
LLU|FUN_030833-T1
LLU|FUN_030834-T1MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
LLU|FUN_030835-T1
LLU|FUN_030836-T1-
LLU|FUN_030837-T1
LLU|FUN_030838-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_030839-T1
LLU|FUN_030840-T1ZINC FINGER PROTEIN
LLU|FUN_030841-T1TF-1 CELL APOPTOSIS RELATED PROTEIN-15
LLU|FUN_030842-T1DRONGO, ISOFORM F
LLU|FUN_030843-T1
LLU|FUN_030844-T1
LLU|FUN_030845-T1
LLU|FUN_030846-T1ZINC FINGER B-BOX DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_030847-T1METHIONYL-TRNA SYNTHETASE
LLU|FUN_030848-T1
LLU|FUN_030849-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_030850-T1HISTIDINE-RICH GLYCOPROTEIN
LLU|FUN_030851-T1
LLU|FUN_030852-T139S RIBOSOMAL PROTEIN L12
LLU|FUN_030853-T1CULLIN
LLU|FUN_030854-T1BONUS, ISOFORM C-RELATED
LLU|FUN_030855-T1CULLIN
LLU|FUN_030856-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_030857-T1PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1
LLU|FUN_030858-T1CYTOKINE RECEPTOR
LLU|FUN_030859-T1
LLU|FUN_030860-T1
LLU|FUN_030861-T1
LLU|FUN_030862-T1IRE1-RELATED
LLU|FUN_030863-T1CHONDROLECTIN VARIANT CHODLFDELTAE.
LLU|FUN_030864-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_030865-T1I[[H]] CHANNEL, ISOFORM E
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