About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_031169-T1
LLU|FUN_031170-T1
LLU|FUN_031171-T1TUMOR ENDOTHELIAL MARKER 7 RELATED
LLU|FUN_031172-T1TUMOR ENDOTHELIAL MARKER 7 RELATED
LLU|FUN_031173-T1
LLU|FUN_031174-T1
LLU|FUN_031175-T1
LLU|FUN_031176-T1
LLU|FUN_031177-T1UNCHARACTERIZED
LLU|FUN_031178-T1
LLU|FUN_031179-T1
LLU|FUN_031180-T1THYMIDYLATE SYNTHASE 1
LLU|FUN_031181-T1SI:CH211-156B7.4
LLU|FUN_031182-T1SUPPRESSOR OF VARIEGATION 4-20-RELATED
LLU|FUN_031183-T1NUCLEAR BODY PROTEIN SP140
LLU|FUN_031184-T1TRANSCRIPTION INTERMEDIARY FACTOR
LLU|FUN_031185-T1CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
LLU|FUN_031186-T1
LLU|FUN_031187-T1
LLU|FUN_031188-T1
LLU|FUN_031189-T1CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
LLU|FUN_031190-T1CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
LLU|FUN_031191-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_031192-T1CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
LLU|FUN_031193-T1CCR4-NOT TRANSCRIPTION COMPLEX RELATED
LLU|FUN_031194-T1CCR4-NOT TRANSCRIPTION COMPLEX RELATED
LLU|FUN_031195-T1
LLU|FUN_031196-T1
LLU|FUN_031197-T1
LLU|FUN_031198-T1
LLU|FUN_031199-T1
LLU|FUN_031200-T1
LLU|FUN_031201-T1
LLU|FUN_031202-T1
LLU|FUN_031203-T1
LLU|FUN_031204-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_031205-T1TRANSLATIONAL ACTIVATOR GCN1-RELATED
LLU|FUN_031206-T1DNA REPAIR PROTEIN RAD51 HOMOLOG 4
LLU|FUN_031207-T1CULLIN
LLU|FUN_031208-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_031209-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_031210-T1A-KINASE ANCHOR PROTEINS
LLU|FUN_031211-T1
LLU|FUN_031212-T1COILIN
LLU|FUN_031213-T1PLASMINOGEN-RELATED
LLU|FUN_031214-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIA
LLU|FUN_031215-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIA
LLU|FUN_031216-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIA
LLU|FUN_031217-T1
LLU|FUN_031218-T1WD REPEAT-CONTAINING PROTEIN POP1
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