About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_030308-T1
LLU|FUN_030309-T1
LLU|FUN_030310-T1
LLU|FUN_030311-T1
LLU|FUN_030312-T1
LLU|FUN_030314-T1
LLU|FUN_030315-T1
LLU|FUN_030316-T1
LLU|FUN_030317-T1
LLU|FUN_030318-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
LLU|FUN_030319-T1GLUTAMATE CYSTEINE LIGASE REGULATORY SUBUNIT
LLU|FUN_030320-T1
LLU|FUN_030321-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
LLU|FUN_030322-T1UNCHARACTERIZED
LLU|FUN_030323-T1
LLU|FUN_030324-T1
LLU|FUN_030325-T1
LLU|FUN_030326-T1
LLU|FUN_030327-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_030328-T1NECTIN-RELATED
LLU|FUN_030329-T1
LLU|FUN_030330-T1
LLU|FUN_030331-T1IG-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_030332-T1
LLU|FUN_030333-T1TENASCIN
LLU|FUN_030334-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
LLU|FUN_030335-T1
LLU|FUN_030336-T1
LLU|FUN_030337-T1
LLU|FUN_030338-T1
LLU|FUN_030339-T1
LLU|FUN_030340-T1
LLU|FUN_030341-T1
LLU|FUN_030342-T1
LLU|FUN_030343-T1
LLU|FUN_030344-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
LLU|FUN_030345-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
LLU|FUN_030346-T1COLLAGEN ALPHA
LLU|FUN_030347-T1
LLU|FUN_030348-T1BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
LLU|FUN_030349-T1ACETOACETYL-COA SYNTHETASE
LLU|FUN_030350-T1
LLU|FUN_030351-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_030352-T1SNF5
LLU|FUN_030353-T1NFATC2-INTERACTING PROTEIN
LLU|FUN_030354-T1POTE ANKYRIN DOMAIN
LLU|FUN_030355-T1SESQUIPEDALIAN
LLU|FUN_030356-T1
LLU|FUN_030357-T1
LLU|FUN_030358-T1
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