About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_030156-T1
LLU|FUN_030157-T1
LLU|FUN_030158-T1
LLU|FUN_030159-T1
LLU|FUN_030160-T1
LLU|FUN_030161-T1UNCHARACTERIZED
LLU|FUN_030162-T1
LLU|FUN_030163-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1
LLU|FUN_030164-T1
LLU|FUN_030165-T1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
LLU|FUN_030166-T1GATOR COMPLEX PROTEIN WDR24
LLU|FUN_030167-T1
LLU|FUN_030168-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
LLU|FUN_030169-T1GATOR COMPLEX PROTEIN WDR24
LLU|FUN_030170-T1
LLU|FUN_030171-T1ACID PHOSPHATASE-RELATED
LLU|FUN_030172-T1ACID PHOSPHATASE-RELATED
LLU|FUN_030173-T1ACID PHOSPHATASE-RELATED
LLU|FUN_030174-T1PEPTIDASE
LLU|FUN_030175-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_030176-T1
LLU|FUN_030177-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_030178-T1TUBULIN POLYGLUTAMYLASE
LLU|FUN_030179-T1
LLU|FUN_030180-T1
LLU|FUN_030181-T1CDGSH IRON SULFUR DOMAIN PROTEIN HOMOLOG
LLU|FUN_030182-T1SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING
LLU|FUN_030183-T1FORMIN-LIKE PROTEIN
LLU|FUN_030184-T1
LLU|FUN_030185-T1
LLU|FUN_030186-T1
LLU|FUN_030187-T1
LLU|FUN_030188-T1
LLU|FUN_030189-T1
LLU|FUN_030190-T1
LLU|FUN_030191-T1
LLU|FUN_030192-T1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
LLU|FUN_030193-T1
LLU|FUN_030194-T1TOLL-LIKE RECEPTOR
LLU|FUN_030195-T1
LLU|FUN_030196-T1TOLL-LIKE RECEPTOR
LLU|FUN_030197-T1
LLU|FUN_030199-T1
LLU|FUN_030200-T1TOLL-LIKE RECEPTOR
LLU|FUN_030201-T1TOLL-LIKE RECEPTOR
LLU|FUN_030202-T1TOLL-LIKE RECEPTOR
LLU|FUN_030203-T1
LLU|FUN_030204-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_030205-T1
LLU|FUN_030206-T1DOCKING PROTEIN RELATED
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