About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_029951-T1ZINC FINGER MYND DOMAIN-CONTAINING
LLU|FUN_029952-T1
LLU|FUN_029953-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_029954-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_029955-T1
LLU|FUN_029956-T1
LLU|FUN_029957-T1
LLU|FUN_029958-T1MYOSIN LIGHT CHAIN 1, 3
LLU|FUN_029960-T1MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1
LLU|FUN_029961-T1
LLU|FUN_029962-T1LOQUACIOUS, ISOFORM B
LLU|FUN_029963-T1LOQUACIOUS, ISOFORM B
LLU|FUN_029964-T1
LLU|FUN_029965-T1EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
LLU|FUN_029966-T1HEME TRANSPORTER HRG1
LLU|FUN_029967-T1PERILIPIN 4
LLU|FUN_029968-T1EXTRA SPINDLE POLES 1-RELATED
LLU|FUN_029969-T1
LLU|FUN_029970-T1
LLU|FUN_029971-T1
LLU|FUN_029972-T1LEUCINE RICH REPEAT PROTEIN
LLU|FUN_029973-T1
LLU|FUN_029974-T1
LLU|FUN_029976-T1
LLU|FUN_029978-T1
LLU|FUN_029979-T1
LLU|FUN_029980-T1
LLU|FUN_029981-T1
LLU|FUN_029982-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_029983-T1
LLU|FUN_029984-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_029985-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_029986-T1
LLU|FUN_029987-T1
LLU|FUN_029988-T1
LLU|FUN_029989-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_029990-T1
LLU|FUN_029991-T1UNCHARACTERIZED
LLU|FUN_029992-T1STABILIN
LLU|FUN_029993-T1G PATCH AND KOW-CONTAINING
LLU|FUN_029994-T1SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED
LLU|FUN_029995-T1DIVALENT CATION TRANSPORTER SOLUTE CARRIER FAMILY 41
LLU|FUN_029996-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_029997-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_029998-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_029999-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_030000-T1DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 3
LLU|FUN_030001-T1SOLUTE CARRIER FAMILY 35
LLU|FUN_030002-T1
LLU|FUN_030003-T1
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