About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS02851LIPIN
HS02852
HS02853ATP-DEPENDENT RNA HELICASE RHLE-RELATED
HS02854CHITIN SYNTHASE
HS02855PROTEIN CBR-CLEC-78
HS02856TITIN
HS02857RIBONUCLEASE T2
HS02858RIBOSOMAL PROTEIN S6 KINASE
HS02859PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED
HS02860PAX6 NEIGHBOR PROTEIN PAXNEB
HS02861PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
HS02862RETICULOCALBIN
HS02863KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS02864COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17
HS02865COAGULATION FACTOR
HS02866UNCHARACTERIZED
HS02867DEP DOMAIN-CONTAINING
HS02868RNA CLEAVAGE STIMULATION FACTOR
HS02869DUAL SPECIFICITY PROTEIN KINASE
HS02870UNCHARACTERIZED
HS02871SPONDIN
HS02872SYNAPTOTAGMIN
HS02873LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
HS02874TRANSCRIPTION FACTOR MAF
HS02875-
HS02876COX ASSEMBLY MITOCHONDRIAL PROTEIN
HS02877CENTROMERE PROTEIN N
HS02878
HS02879PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
HS02880GENETIC SUPPRESSOR ELEMENT 1
HS02881CYTOCHROME C OXIDASE SUBUNIT IV
HS02882GENETIC SUPPRESSOR ELEMENT 1
HS02883DNA REPLICATION COMPLEX GINS PROTEIN PSF2
HS02884ER MEMBRANE PROTEIN COMPLEX
HS02885DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED
HS02886INTERFERON REGULATORY FACTOR
HS02887FORKHEAD BOX PROTEIN BINIOU
HS02888DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN
HS028895-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED
HS02890ATP-DEPENDENT PROTEASE
HS02891PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN
HS02892NULP1-RELATED
HS02893CYTOCHROME B-245 LIGHT CHAIN
HS02894DIPHOSPHOMEVALONATE DECARBOXYLASE
HS02895PROGRAMMED CELL DEATH PROTEIN 5
HS02896URICASE AND TRANSTHYRETIN-RELATED
HS02897HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
HS02898CYSTEINE-RICH SECRETORY PROTEIN-RELATED
HS02899EGF-LIKE DOMAIN-CONTAINING PROTEIN
HS02900CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
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