About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS02801TETRASPANIN
HS02802KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS02803DNA2/NAM7 HELICASE FAMILY
HS02804PHENAZINE BIOSYNTHESIS PROTEIN
HS02805HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
HS02806RUN AND FYVE DOMAIN-CONTAINING PROTEIN 2-LIKE PROTEIN
HS02807MADF DOMAIN TRANSCRIPTION FACTOR
HS02808CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
HS02809CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
HS02810PROTEIN MIS12 HOMOLOG
HS02811RHO FAMILY GTPASE
HS02812PROTEIN PHOSPHATASE 2C
HS02813PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED
HS02814TATA-BOX BINDING PROTEIN
HS0281526S PROTEASOME REGULATORY SUBUNIT
HS02816METALLOPROTEASE TLDD
HS02817HL01030P-RELATED
HS02818DRAB11-RELATED
HS02819UNCHARACTERIZED
HS02820ACTIN
HS02821ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
HS02822UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG
HS02823N-ACETYLGALACTOSAMINYLTRANSFERASE
HS02824HISTONE-LYSINE N-METHYLTRANSFERASE SMYD
HS02825CMF/LEK/CENP CELL DIVISION-RELATED
HS02826POTASSIUM CHANNEL, SUBFAMILY K
HS02827
HS02828MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
HS02829ADP-DEPENDENT GLUCOKINASE
HS02830CYSTEINE PROTEASE FAMILY C1-RELATED
HS02831XK-RELATED PROTEIN
HS02832PROTEIN EVA-1 HOMOLOG B-RELATED
HS02833RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
HS02834GC-RICH SEQUENCE DNA-BINDING FACTOR
HS02835UNCHARACTERIZED
HS02836DIMETHYLADENOSINE TRANSFERASE
HS02837CONSORTIN
HS02838HISTONE-LYSINE N-METHYLTRANSFERASE SMYD
HS02839UNCHARACTERIZED
HS02840PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER
HS02841FRIZZLED
HS02842
HS02843STAR-RELATED LIPID TRANSFER PROTEIN 9
HS02844KERATINOCYTE-ASSOCIATED PROTEIN 3
HS02845SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED
HS02846SETA BINDING PROTEIN 1
HS02847CYTOKINE RECEPTOR
HS02848KNIRPS-RELATED PROTEIN-RELATED
HS02849UNCHARACTERIZED
HS02850GREB1-RELATED
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