About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 50 51 52 53 54 55 56 57 58 59 Forward> Last>>        450 pages in total

Gene IDDescription
HS02751TALIN
HS02752DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
HS02753NFAT
HS02754
HS02755-
HS02756HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
HS02757CELL ADHESION MOLECULE
HS02758KELCH PROTEIN
HS02759CHEMOTACTIC RECEPTOR
HS02760E3 UBIQUITIN-PROTEIN LIGASE RNF8
HS02761GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE
HS02762SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN
HS02763SI:DKEY-9I5.2-RELATED
HS02764SI:CH211-243P7.3-RELATED
HS02765
HS02766CONTACTIN 5
HS02767AN1-TYPE ZINC FINGER PROTEIN
HS02768AMINO ACID TRANSPORTER
HS02769TESTOSTERONE-REGULATED PROTEIN RP2
HS02770R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG
HS02771ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
HS02772TELOMERIC REPEAT-BINDING FACTOR 2 TERF2
HS02773CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7
HS02774CDC42 SMALL EFFECTOR PROTEIN HOMOLOG
HS02775INTERFERON REGULATORY FACTOR
HS02776CYTOKINE RECEPTOR
HS02777
HS02778DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS
HS02779
HS02780ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
HS02781ZONA PELLUCIDA SPERM-BINDING PROTEIN
HS02782ZONA PELLUCIDA SPERM-BINDING PROTEIN
HS02783
HS02784
HS02785
HS02786
HS02787
HS02788
HS02789
HS02790
HS02791
HS02792
HS02793UPF0041 BRAIN PROTEIN 44-RELATED
HS02794KIF1-BINDING PROTEIN
HS02795
HS02796VACUOLAR PROTEIN SORTING 26 RELATED
HS02797ATP-DEPENDENT RNA AND DNA HELICASE
HS02798HEXOKINASE
HS02799HEXOKINASE
HS02800G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED
TOP