The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS02751 | TALIN |
HS02752 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 |
HS02753 | NFAT |
HS02754 | |
HS02755 | - |
HS02756 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
HS02757 | CELL ADHESION MOLECULE |
HS02758 | KELCH PROTEIN |
HS02759 | CHEMOTACTIC RECEPTOR |
HS02760 | E3 UBIQUITIN-PROTEIN LIGASE RNF8 |
HS02761 | GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE |
HS02762 | SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN |
HS02763 | SI:DKEY-9I5.2-RELATED |
HS02764 | SI:CH211-243P7.3-RELATED |
HS02765 | |
HS02766 | CONTACTIN 5 |
HS02767 | AN1-TYPE ZINC FINGER PROTEIN |
HS02768 | AMINO ACID TRANSPORTER |
HS02769 | TESTOSTERONE-REGULATED PROTEIN RP2 |
HS02770 | R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG |
HS02771 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
HS02772 | TELOMERIC REPEAT-BINDING FACTOR 2 TERF2 |
HS02773 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
HS02774 | CDC42 SMALL EFFECTOR PROTEIN HOMOLOG |
HS02775 | INTERFERON REGULATORY FACTOR |
HS02776 | CYTOKINE RECEPTOR |
HS02777 | |
HS02778 | DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS |
HS02779 | |
HS02780 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
HS02781 | ZONA PELLUCIDA SPERM-BINDING PROTEIN |
HS02782 | ZONA PELLUCIDA SPERM-BINDING PROTEIN |
HS02783 | |
HS02784 | |
HS02785 | |
HS02786 | |
HS02787 | |
HS02788 | |
HS02789 | |
HS02790 | |
HS02791 | |
HS02792 | |
HS02793 | UPF0041 BRAIN PROTEIN 44-RELATED |
HS02794 | KIF1-BINDING PROTEIN |
HS02795 | |
HS02796 | VACUOLAR PROTEIN SORTING 26 RELATED |
HS02797 | ATP-DEPENDENT RNA AND DNA HELICASE |
HS02798 | HEXOKINASE |
HS02799 | HEXOKINASE |
HS02800 | G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED |