The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS02501 | RABPHILIN, ISOFORM A |
HS02502 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
HS02503 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
HS02504 | TRANSMEMBRANE PROTEIN 248-LIKE |
HS02505 | DNA LIGASE 1/3 FAMILY MEMBER |
HS02506 | DNA REPAIR PROTEIN RAD51 HOMOLOG 4 |
HS02507 | UNCHARACTERIZED |
HS02508 | DELTEX-RELATED |
HS02509 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
HS02510 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
HS02511 | STEROL DESATURASE |
HS02512 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
HS02513 | |
HS02514 | IP01015P-RELATED |
HS02515 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
HS02516 | HISTONE H2A |
HS02517 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
HS02518 | PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE |
HS02519 | UNCHARACTERIZED |
HS02520 | UPF0461 PROTEIN C5ORF24 |
HS02521 | ATP-DEPENDENT RNA HELICASE DBP3 |
HS02522 | CALCIUM-SIGNAL MODULATING CYCLOPHILIN LIGAND CAML |
HS02523 | SEC24-RELATED PROTEIN |
HS02524 | RE74312P |
HS02525 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
HS02526 | |
HS02527 | PHD FINGER PROTEINS |
HS02528 | PROTEIN CBG11839-RELATED |
HS02529 | SKP1 |
HS02530 | |
HS02531 | UBIQUITIN-CONJUGATING ENZYME E2 |
HS02532 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
HS02533 | TRANSCRIPTION FACTOR 7 FAMILY MEMBER |
HS02534 | VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL |
HS02535 | |
HS02536 | UNCHARACTERIZED |
HS02537 | UNCHARACTERIZED |
HS02538 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS02539 | |
HS02540 | BASIGIN RELATED |
HS02541 | CYTOSKELETON-ASSOCIATED PROTEIN 4 |
HS02542 | UNCHARACTERIZED |
HS02543 | UNCHARACTERIZED |
HS02544 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
HS02545 | INTERFERON REGULATORY FACTOR |
HS02546 | SOLUTE CARRIER FAMILY 22 MEMBER |
HS02547 | SOLUTE CARRIER FAMILY 22 MEMBER |
HS02548 | SOLUTE CARRIER FAMILY 22 MEMBER |
HS02549 | SOLUTE CARRIER FAMILY 22 MEMBER |
HS02550 | PROTEIN PHOSPHATASE |