About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS02501RABPHILIN, ISOFORM A
HS02502ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS02503DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
HS02504TRANSMEMBRANE PROTEIN 248-LIKE
HS02505DNA LIGASE 1/3 FAMILY MEMBER
HS02506DNA REPAIR PROTEIN RAD51 HOMOLOG 4
HS02507UNCHARACTERIZED
HS02508DELTEX-RELATED
HS02509GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1
HS02510DYNACTIN 1-RELATED MICROTUBULE-BINDING
HS02511STEROL DESATURASE
HS02512ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS02513
HS02514IP01015P-RELATED
HS02515ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS02516HISTONE H2A
HS02517PITUITARY HOMEOBOX HOMOLOG PTX1
HS02518PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE
HS02519UNCHARACTERIZED
HS02520UPF0461 PROTEIN C5ORF24
HS02521ATP-DEPENDENT RNA HELICASE DBP3
HS02522CALCIUM-SIGNAL MODULATING CYCLOPHILIN LIGAND CAML
HS02523SEC24-RELATED PROTEIN
HS02524RE74312P
HS02525CXC DOMAIN-CONTAINING PROTEIN-RELATED
HS02526
HS02527PHD FINGER PROTEINS
HS02528PROTEIN CBG11839-RELATED
HS02529SKP1
HS02530
HS02531UBIQUITIN-CONJUGATING ENZYME E2
HS02532SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
HS02533TRANSCRIPTION FACTOR 7 FAMILY MEMBER
HS02534VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL
HS02535
HS02536UNCHARACTERIZED
HS02537UNCHARACTERIZED
HS02538REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS02539
HS02540BASIGIN RELATED
HS02541CYTOSKELETON-ASSOCIATED PROTEIN 4
HS02542UNCHARACTERIZED
HS02543UNCHARACTERIZED
HS02544LONG-CHAIN-FATTY-ACID--COA LIGASE
HS02545INTERFERON REGULATORY FACTOR
HS02546SOLUTE CARRIER FAMILY 22 MEMBER
HS02547SOLUTE CARRIER FAMILY 22 MEMBER
HS02548SOLUTE CARRIER FAMILY 22 MEMBER
HS02549SOLUTE CARRIER FAMILY 22 MEMBER
HS02550PROTEIN PHOSPHATASE
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