The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS02901 | AMMONIUM TRANSPORTER |
HS02902 | TYROSINE-PROTEIN KINASE |
HS02903 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
HS02904 | STEREOCILIN RELATED |
HS02905 | DYNEIN REGULATORY COMPLEX SUBUNIT 4 |
HS02906 | TRANSCRIPTION FACTOR E2F |
HS02907 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
HS02908 | AMINO ACID TRANSPORTER |
HS02909 | ASPARTATE AMINOTRANSFERASE |
HS02910 | CALBINDIN |
HS02911 | UNCHARACTERIZED |
HS02912 | AMINO ACID TRANSPORTER |
HS02913 | NEURITIN-RELATED |
HS02914 | THAP DOMAIN PROTEIN 11 |
HS02915 | BCDNA.GH03377 |
HS02916 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
HS02917 | CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4 |
HS02918 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
HS02919 | TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN |
HS02920 | HISTONE ACETYLTRANSFERASE COMPLEX |
HS02921 | |
HS02922 | ZINC FINGER PROTEIN 200 |
HS02923 | PROTEIN KINASE PKN/PRK1, EFFECTOR |
HS02924 | CASEIN KINASE-RELATED |
HS02925 | LD44762P |
HS02926 | GLYCOSYLTRANSFERASE |
HS02927 | CELL CYCLE PROGRESSION PROTEIN 1 |
HS02928 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
HS02929 | RFX TRANSCRIPTION FACTOR FAMILY |
HS02930 | TSEC1-RELATED |
HS02931 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
HS02932 | ZINC FINGER PROTEIN |
HS02933 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR |
HS02934 | CINGULIN-LIKE PROTEIN 1-RELATED |
HS02935 | GDOWN1 |
HS02936 | GDOWN1 |
HS02937 | ALDEHYDE DEHYDROGENASE-RELATED |
HS02938 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
HS02939 | LIPASE |
HS02940 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
HS02941 | NF-E2 INDUCIBLE PROTEIN |
HS02942 | SCAFFOLD ATTACHMENT FACTOR B-RELATED |
HS02943 | RING ZINC FINGER |
HS02944 | MYOSIN |
HS02945 | MYOTUBULARIN-RELATED |
HS02946 | ATAXIN 1 |
HS02947 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
HS02948 | ADAPTIN, ALPHA/GAMMA/EPSILON |
HS02949 | - |
HS02950 | GEO08273P1-RELATED |