About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_59853-0.14OS10G0105400 PROTEIN
Bpl_scaf_59853-0.15
Bpl_scaf_59868-0.6SOLUTE CARRIER FAMILY 17
Bpl_scaf_59868-0.7
Bpl_scaf_59873-0.10PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_59873-0.11PUTATIVE-RELATED
Bpl_scaf_59873-0.23TYROSINASE FAMILY MEMBER
Bpl_scaf_5989-0.0
Bpl_scaf_5989-0.2PROPERDIN
Bpl_scaf_5989-0.3
Bpl_scaf_5989-0.7
Bpl_scaf_5989-1.15
Bpl_scaf_5989-1.16THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
Bpl_scaf_5989-1.17PROPERDIN
Bpl_scaf_5989-1.18
Bpl_scaf_5989-1.7
Bpl_scaf_5989-1.8
Bpl_scaf_59901-0.4NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_59901-0.5
Bpl_scaf_59901-0.8
Bpl_scaf_59901-0.9SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_59906-0.1
Bpl_scaf_59906-0.5SCAVENGER RECEPTOR DOMAIN-CONTAINING
Bpl_scaf_59921-0.4CONTACTIN 5
Bpl_scaf_59921-0.5
Bpl_scaf_59930-0.13
Bpl_scaf_59930-0.17
Bpl_scaf_59930-0.19CEREBELLIN-RELATED
Bpl_scaf_59930-0.22
Bpl_scaf_59930-0.24EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
Bpl_scaf_59940-0.0
Bpl_scaf_59940-0.6
Bpl_scaf_59958-0.10
Bpl_scaf_59958-0.5
Bpl_scaf_59958-0.7
Bpl_scaf_59958-0.8
Bpl_scaf_59958-0.9
Bpl_scaf_59967-0.6PROTEIN CBG04600
Bpl_scaf_59967-0.7YCCV-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_6000-0.0GLUTATHIONE S-TRANSFERASE-RELATED
Bpl_scaf_60007-0.18
Bpl_scaf_60007-0.19POLYCYSTIN FAMILY MEMBER
Bpl_scaf_60007-0.20POLYCYSTIN FAMILY MEMBER
Bpl_scaf_60007-0.22
Bpl_scaf_60025-0.10CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B
Bpl_scaf_60035-0.10
Bpl_scaf_60035-0.15
Bpl_scaf_60035-0.16
Bpl_scaf_60035-0.29
Bpl_scaf_60035-0.31F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
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