About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_60087-0.0
Bpl_scaf_60104-0.17
Bpl_scaf_60104-0.22
Bpl_scaf_60104-0.29POTE ANKYRIN DOMAIN
Bpl_scaf_60104-0.30ROLLING PEBBLES, ISOFORM B
Bpl_scaf_60104-0.31MOLTING PROTEIN MLT-4
Bpl_scaf_60104-0.33
Bpl_scaf_60104-0.34
Bpl_scaf_60119-0.11POLYCYSTIN FAMILY MEMBER
Bpl_scaf_60119-0.12POLYCYSTIN-1
Bpl_scaf_60119-0.16DNA POLYMERASE
Bpl_scaf_60119-0.8
Bpl_scaf_60133-0.15ATP-DEPENDENT DNA HELICASE
Bpl_scaf_60133-0.17
Bpl_scaf_60133-0.18LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Bpl_scaf_60133-0.7
Bpl_scaf_60133-1.1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_60133-1.6GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_60134-0.0
Bpl_scaf_60134-0.10DYMECLIN
Bpl_scaf_60134-1.0
Bpl_scaf_60134-1.1
Bpl_scaf_60134-1.20MOLTING PROTEIN MLT-4
Bpl_scaf_60144-0.5LD44762P
Bpl_scaf_60144-0.640S RIBOSOMAL PROTEIN S27
Bpl_scaf_60144-1.6LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71
Bpl_scaf_60144-1.7
Bpl_scaf_60145-0.5UNCHARACTERIZED
Bpl_scaf_60149-0.1UNCHARACTERIZED
Bpl_scaf_60149-1.31NECTIN-RELATED
Bpl_scaf_60149-1.32SIDESTEP PROTEIN
Bpl_scaf_60149-1.33SIDESTEP PROTEIN
Bpl_scaf_60149-1.34SIDESTEP PROTEIN
Bpl_scaf_60149-1.35IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_60166-0.0
Bpl_scaf_60167-0.11CADHERIN-23
Bpl_scaf_60167-0.15CADHERIN-23
Bpl_scaf_60167-0.16UNCHARACTERIZED
Bpl_scaf_60167-0.2CADHERIN-23
Bpl_scaf_60167-1.12PIKACHURIN-LIKE PROTEIN
Bpl_scaf_60167-1.15
Bpl_scaf_60170-0.0
Bpl_scaf_60170-0.1
Bpl_scaf_60175-0.2
Bpl_scaf_60176-0.15
Bpl_scaf_60176-0.16
Bpl_scaf_60176-0.17SUGAR TRANSPORTER
Bpl_scaf_60176-0.6MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_60176-1.14E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Bpl_scaf_60176-1.15
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