About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_60249-1.0
Bpl_scaf_60249-1.10INTEGRIN ALPHA REPEAT DOMAIN-CONTAINING
Bpl_scaf_60249-1.15VERTNIN
Bpl_scaf_60249-1.86-PHOSPHOGLUCONATE DEHYDROGENASE
Bpl_scaf_60249-2.18PUTATIVE-RELATED
Bpl_scaf_60249-2.26
Bpl_scaf_60249-2.37
Bpl_scaf_60249-2.38PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_60262-0.0AGAP007547-PA
Bpl_scaf_60263-0.14VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_60263-0.17VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_60263-0.21
Bpl_scaf_60263-0.22HYDROXYLAMINE REDUCTASE
Bpl_scaf_60263-0.23HYDROXYLAMINE REDUCTASE
Bpl_scaf_60264-0.5
Bpl_scaf_60264-1.10
Bpl_scaf_60264-1.11AVIDIN-RELATED
Bpl_scaf_60270-0.6
Bpl_scaf_60272-0.6CBP/P300-RELATED
Bpl_scaf_60273-0.6PROTEIN TORNADO 1
Bpl_scaf_60274-0.1TEMPTIN
Bpl_scaf_60274-0.7
Bpl_scaf_60274-1.3VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_60274-1.5VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_60274-2.0
Bpl_scaf_60274-2.2BONUS, ISOFORM C-RELATED
Bpl_scaf_60274-2.3
Bpl_scaf_60274-3.12CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_60274-3.14
Bpl_scaf_60274-3.15
Bpl_scaf_60275-0.3AMMONIUM TRANSPORTER
Bpl_scaf_60284-0.0
Bpl_scaf_60284-0.4
Bpl_scaf_60284-1.4
Bpl_scaf_60284-2.11E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED
Bpl_scaf_60284-2.12DEATH DOMAIN-ASSOCIATED PROTEIN 6 DAXX
Bpl_scaf_60284-2.13PUTATIVE-RELATED
Bpl_scaf_60284-2.22
Bpl_scaf_60284-3.11
Bpl_scaf_60284-3.12DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_60284-3.23COLLAGEN ALPHA
Bpl_scaf_60284-3.24
Bpl_scaf_60284-3.25SULFOTRANSFERASE SULT
Bpl_scaf_60284-3.28
Bpl_scaf_60284-3.29COLLAGEN ALPHA
Bpl_scaf_60286-0.1
Bpl_scaf_60288-0.19ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_60289-0.3UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED
Bpl_scaf_60289-1.6RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_60289-1.7STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
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