About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_60539-4.4
Bpl_scaf_60539-5.0
Bpl_scaf_60539-5.7HOMEOBOX PROTEIN EMX-RELATED
Bpl_scaf_60539-5.8
Bpl_scaf_60539-6.13
Bpl_scaf_60539-6.19PROTEIN FAM204A
Bpl_scaf_60539-6.21
Bpl_scaf_60539-6.22
Bpl_scaf_60539-6.23
Bpl_scaf_60539-6.24
Bpl_scaf_6054-0.0
Bpl_scaf_60541-0.6ASAP FAMILY MEMBER
Bpl_scaf_60551-0.11TRANSLATION INITIATION FACTOR EIF-2B
Bpl_scaf_60551-0.14
Bpl_scaf_60564-0.18SIGMA 1-TYPE OPIOID RECEPTOR-RELATED
Bpl_scaf_60564-0.2TRANSMEMBRANE PROTEIN 2-RELATED
Bpl_scaf_60564-0.20PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO
Bpl_scaf_60564-0.27PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED
Bpl_scaf_60564-0.29
Bpl_scaf_60564-0.30
Bpl_scaf_60577-0.1
Bpl_scaf_60577-0.12
Bpl_scaf_60577-0.9
Bpl_scaf_6059-0.2
Bpl_scaf_60593-0.11
Bpl_scaf_60593-0.13DYNEIN HEAVY CHAIN FAMILY PROTEIN
Bpl_scaf_60593-0.19DYNEIN HEAVY CHAIN
Bpl_scaf_60593-0.20DYNEIN HEAVY CHAIN FAMILY PROTEIN
Bpl_scaf_60593-0.24SYNAPTOSOMAL ASSOCIATED PROTEIN
Bpl_scaf_60593-0.5
Bpl_scaf_60605-0.10GPI-ANCHOR TRANSAMIDASE
Bpl_scaf_60605-0.12NUCLEOTIDE KINASE
Bpl_scaf_60605-0.22NUCLEOTIDE KINASE
Bpl_scaf_60605-0.23NUCLEOTIDE KINASE
Bpl_scaf_60605-0.26
Bpl_scaf_60605-0.9
Bpl_scaf_60620-0.2
Bpl_scaf_60620-0.3G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_60620-0.4G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_60628-0.3DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_60637-0.0
Bpl_scaf_60637-0.10
Bpl_scaf_60637-0.13
Bpl_scaf_60637-0.5
Bpl_scaf_60638-0.38NEPHRIN
Bpl_scaf_60638-0.40IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_60638-0.41PLEXIN
Bpl_scaf_60638-0.44
Bpl_scaf_60638-0.45NEPHRIN
Bpl_scaf_60648-0.13ANKYRIN REPEAT CONTAINING
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