About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_60657-0.18
Bpl_scaf_60657-0.19REGULATOR-RELATED
Bpl_scaf_60657-0.20ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_60657-0.8
Bpl_scaf_60672-1.0
Bpl_scaf_60672-1.1
Bpl_scaf_60672-1.7
Bpl_scaf_60678-0.0
Bpl_scaf_60678-0.2INHIBITOR OF APOPTOSIS
Bpl_scaf_6068-0.4CELL DIVISION PROTEIN KINASE
Bpl_scaf_6068-0.9
Bpl_scaf_6068-1.103'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
Bpl_scaf_6068-1.20SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Bpl_scaf_6068-1.7SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_6068-2.12
Bpl_scaf_60684-0.0
Bpl_scaf_60686-0.2
Bpl_scaf_60686-0.5
Bpl_scaf_60686-0.7
Bpl_scaf_60686-1.0
Bpl_scaf_60686-1.10SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_60688-0.1HEAT SHOCK PROTEIN HSP-12.2-RELATED
Bpl_scaf_60691-0.0
Bpl_scaf_60691-1.12CYSTEINE DESULFURYLASE FAMILY MEMBER
Bpl_scaf_60691-1.13CELL DIVISION PROTEIN KINASE
Bpl_scaf_60691-1.21
Bpl_scaf_60696-0.1
Bpl_scaf_60700-0.6
Bpl_scaf_60700-0.7POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATED
Bpl_scaf_60700-0.8
Bpl_scaf_60700-1.16AGAP001623-PA
Bpl_scaf_60700-1.183-5 EXONUCLEASE
Bpl_scaf_60700-1.23DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
Bpl_scaf_60703-0.1
Bpl_scaf_60708-0.6HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_60708-1.0
Bpl_scaf_60708-1.10HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_60708-1.13MUCIN 4-RELATED
Bpl_scaf_60708-1.14MUCIN 4-RELATED
Bpl_scaf_60708-1.5
Bpl_scaf_60708-1.9HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_60708-2.3DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_60708-2.5HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_60708-2.6
Bpl_scaf_60716-0.0
Bpl_scaf_60716-1.12F5A8.9 PROTEIN
Bpl_scaf_60716-1.13PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN
Bpl_scaf_60716-1.6WD REPEAT CONTAINING PROTEIN
Bpl_scaf_60716-2.16GAMMA GLUTAMYL TRANSPEPTIDASE
Bpl_scaf_60716-2.17BTB DOMAIN-CONTAINING PROTEIN
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