About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_60781-0.13CEREBELLIN-RELATED
Bpl_scaf_60781-0.6
Bpl_scaf_60783-0.4
Bpl_scaf_60783-0.5
Bpl_scaf_60785-0.4BLR2807 PROTEIN
Bpl_scaf_60785-1.4BLR2807 PROTEIN
Bpl_scaf_60785-2.1CEREBELLIN-RELATED
Bpl_scaf_60785-2.2CEREBELLIN-RELATED
Bpl_scaf_60785-3.10NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_60785-3.15SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B
Bpl_scaf_60785-3.17
Bpl_scaf_60785-3.40SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Bpl_scaf_60785-3.5
Bpl_scaf_60789-0.6
Bpl_scaf_60789-0.8
Bpl_scaf_6079-0.3
Bpl_scaf_6079-1.0
Bpl_scaf_6079-1.2L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_6079-1.6
Bpl_scaf_6079-2.14
Bpl_scaf_6079-2.15
Bpl_scaf_6079-2.8IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_60790-0.0
Bpl_scaf_60792-0.2
Bpl_scaf_60793-0.0
Bpl_scaf_60795-0.6
Bpl_scaf_60795-1.0
Bpl_scaf_60795-1.6
Bpl_scaf_60795-2.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_60795-3.15ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_60795-3.42ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_60795-3.43ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_60800-0.5
Bpl_scaf_60874-0.3
Bpl_scaf_60884-0.4
Bpl_scaf_6089-0.2DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_6089-1.13
Bpl_scaf_6089-1.8
Bpl_scaf_6089-1.9
Bpl_scaf_6089-2.12
Bpl_scaf_6089-2.13
Bpl_scaf_6089-2.14
Bpl_scaf_6089-2.4
Bpl_scaf_60893-0.1
Bpl_scaf_60898-0.0ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_6090-0.5
Bpl_scaf_6090-0.7
Bpl_scaf_6090-1.13
Bpl_scaf_6090-1.14ASPARTYL/LYSYL-TRNA SYNTHETASE
Bpl_scaf_6090-1.18
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