About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_030374-T1ATP-DEPENDENT DNA HELICASE
OS493_030375-T1
OS493_030376-T1
OS493_030377-T1
OS493_030378-T1
OS493_030380-T1
OS493_030381-T1
OS493_030382-T1
OS493_030383-T1
OS493_030384-T1
OS493_030385-T1F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
OS493_030386-T1
OS493_030387-T1
OS493_030388-T1
OS493_030389-T1
OS493_030390-T1
OS493_030391-T1
OS493_030392-T1
OS493_030393-T1
OS493_030394-T1
OS493_030395-T1
OS493_030396-T1
OS493_030397-T1
OS493_030398-T1
OS493_030399-T1
OS493_030400-T1
OS493_030401-T1
OS493_030402-T1
OS493_030403-T1
OS493_030404-T1
OS493_030405-T1
OS493_030406-T1
OS493_030407-T1SERINE-THREONINE PROTEIN KINASE
OS493_030408-T1
OS493_030409-T1
OS493_030410-T1
OS493_030411-T1
OS493_030412-T1
OS493_030413-T1KETOACID-COENZYME A TRANSFERASE
OS493_030414-T1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
OS493_030415-T1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
OS493_030418-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_030419-T1DNA REPAIR ENDONUCLEASE XPF
OS493_030420-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_030421-T1
OS493_030422-T1
OS493_030423-T1
OS493_030424-T1CUB DOMAIN-CONTAINING PROTEIN
OS493_030425-T1SPLICING FACTOR YJU2
OS493_030426-T1
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