About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 553 554 555 556 557 558 559 560 561 562 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_030092-T1
OS493_030093-T1EXONUCLEASE V
OS493_030094-T1TRPL TRANSLOCATION DEFECT PROTEIN 14
OS493_030095-T1ARP2/3 COMPLEX 21 KD SUBUNIT
OS493_030096-T1UNCHARACTERIZED
OS493_030098-T1BCL7 RELATED
OS493_030099-T1
OS493_030100-T1REPLICATION FACTOR A 1, RFA1
OS493_030101-T1UNCHARACTERIZED
OS493_030102-T1CRUMBS FAMILY MEMBER
OS493_030103-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
OS493_030104-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
OS493_030105-T1F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
OS493_030106-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_030107-T1
OS493_030108-T1
OS493_030109-T1ACETOACETYL-COA SYNTHETASE
OS493_030110-T1NITRILASE C965.09-RELATED
OS493_030111-T1STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15
OS493_030112-T1RAN GTPASE
OS493_030113-T1
OS493_030115-T1PHOSPHOENOLPYRUVATE CARBOXYLASE
OS493_030116-T1PROTEIN PHOSPHATASE
OS493_030117-T1CALCIUM-TRANSPORTING ATPASE
OS493_030118-T1CALCIUM-TRANSPORTING ATPASE
OS493_030119-T1SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA
OS493_030120-T1CALCIUM-TRANSPORTING ATPASE
OS493_030121-T1CALCIUM-TRANSPORTING ATPASE
OS493_030122-T1PROTEIN FAM220A
OS493_030123-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
OS493_030125-T1IFT140/172-RELATED
OS493_030126-T1IFT140/172-RELATED
OS493_030127-T1IFT140/172-RELATED
OS493_030128-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
OS493_030129-T1UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE
OS493_030130-T1
OS493_030131-T1
OS493_030132-T1
OS493_030133-T1
OS493_030134-T1TRPL TRANSLOCATION DEFECT PROTEIN 14
OS493_030135-T1TRPL TRANSLOCATION DEFECT PROTEIN 14
OS493_030136-T1
OS493_030138-T1FLAVIN MONOAMINE OXIDASE
OS493_030139-T1ANKYRIN REPEAT PROTEIN
OS493_030140-T1MYOTROPHIN
OS493_030141-T1
OS493_030142-T1
OS493_030143-T1
OS493_030144-T1PENTRAXIN
OS493_030145-T1PENTRAXIN
TOP