About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_029922-T1GOLGIN
OS493_029923-T1PROTEIN TAG-278-RELATED
OS493_029924-T1
OS493_029925-T1
OS493_029926-T1
OS493_029927-T1U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
OS493_029928-T1
OS493_029930-T1
OS493_029931-T1
OS493_029932-T1PA14 DOMAIN-CONTAINING PROTEIN
OS493_029933-T1
OS493_029934-T1
OS493_029935-T1
OS493_029937-T1
OS493_029939-T1
OS493_029941-T1
OS493_029943-T1
OS493_029944-T1
OS493_029945-T1
OS493_029948-T1
OS493_029949-T1
OS493_029951-T1
OS493_029952-T1
OS493_029953-T1
OS493_029954-T1
OS493_029955-T1
OS493_029956-T1
OS493_029957-T1
OS493_029958-T1
OS493_029959-T1HIV-INDUCED PROTEIN-7-LIKE PROTEASE
OS493_029960-T1PROTEIN CBG12474
OS493_029961-T1
OS493_029962-T1BATTENIN
OS493_029963-T1
OS493_029964-T1
OS493_029965-T1LEUCOKININ RECEPTOR-RELATED
OS493_029966-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_029967-T1
OS493_029968-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
OS493_029969-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
OS493_029970-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
OS493_029971-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
OS493_029972-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
OS493_029973-T1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
OS493_029974-T1RHO-GTPASE-ACTIVATING PROTEIN LRG1
OS493_029975-T1RHO-GTPASE-ACTIVATING PROTEIN LRG1
OS493_029976-T1RHO-GTPASE-ACTIVATING PROTEIN LRG1
OS493_029977-T1RHO-GTPASE-ACTIVATING PROTEIN LRG1
OS493_029978-T1FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
OS493_029979-T1PHOSPHOGLYCOLATE PHOSPHATASE
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