About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_029253-T1DNAJ-LIKE-2, ISOFORM A-RELATED
OS493_029254-T1DNAJ-LIKE-2, ISOFORM A-RELATED
OS493_029255-T1HIGH MOBILITY GROUP PROTEIN 2
OS493_029256-T1
OS493_029257-T1G-PROTEIN COUPLED RECEPTOR
OS493_029258-T1
OS493_029259-T1QUINONE OXIDOREDUCTASE
OS493_029260-T1
OS493_029261-T1
OS493_029262-T1
OS493_029263-T1
OS493_029264-T1
OS493_029265-T1
OS493_029266-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_029267-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_029268-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_029269-T1
OS493_029271-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_029272-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_029273-T1
OS493_029274-T1
OS493_029275-T1
OS493_029277-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_029278-T1DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
OS493_029279-T1TUMOR NECROSIS FACTOR RECEPTOR
OS493_029281-T1TUMOR NECROSIS FACTOR RECEPTOR
OS493_029282-T1
OS493_029283-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_029284-T1
OS493_029285-T1
OS493_029286-T1
OS493_029287-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029288-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_029289-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029290-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029291-T1
OS493_029292-T1
OS493_029293-T1
OS493_029294-T1
OS493_029295-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029296-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029297-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
OS493_029298-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029299-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_029300-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029301-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_029302-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
OS493_029303-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_029304-T1SRCR DOMAIN-CONTAINING PROTEIN
OS493_029305-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
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