About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_026695-T1
LLU|FUN_026696-T1
LLU|FUN_026697-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
LLU|FUN_026698-T1
LLU|FUN_026699-T1UNCHARACTERIZED
LLU|FUN_026700-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
LLU|FUN_026701-T1
LLU|FUN_026702-T1
LLU|FUN_026703-T1G PROTEIN-COUPLED RECEPTOR-RELATED
LLU|FUN_026704-T1
LLU|FUN_026705-T1
LLU|FUN_026706-T1
LLU|FUN_026707-T1
LLU|FUN_026708-T1G PROTEIN-COUPLED RECEPTOR-RELATED
LLU|FUN_026709-T1
LLU|FUN_026710-T1
LLU|FUN_026711-T1L-CYSTEINE DESULFHYDRASE
LLU|FUN_026712-T1
LLU|FUN_026713-T1L-CYSTEINE DESULFHYDRASE
LLU|FUN_026714-T1L-CYSTEINE DESULFHYDRASE
LLU|FUN_026715-T1MORN REPEAT-CONTAINING PROTEIN 5
LLU|FUN_026716-T1GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
LLU|FUN_026717-T1
LLU|FUN_026718-T1
LLU|FUN_026719-T1PAR-6-RELATED
LLU|FUN_026720-T1
LLU|FUN_026721-T1
LLU|FUN_026722-T1
LLU|FUN_026723-T1SODIUM/POTASSIUM/CALCIUM EXCHANGER
LLU|FUN_026724-T1
LLU|FUN_026725-T1
LLU|FUN_026726-T1
LLU|FUN_026727-T1
LLU|FUN_026728-T1
LLU|FUN_026729-T1SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN
LLU|FUN_026730-T1UBIQUITIN-ACTIVATING ENZYME E1
LLU|FUN_026731-T1
LLU|FUN_026732-T1
LLU|FUN_026733-T1UNCHARACTERIZED
LLU|FUN_026734-T1
LLU|FUN_026735-T1
LLU|FUN_026736-T1DUAL SPECIFICITY PROTEIN KINASE
LLU|FUN_026737-T1
LLU|FUN_026738-T1LIN52 FAMILY MEMBER
LLU|FUN_026739-T1MALONATE-SEMIALDEHYDE DEHYDROGENASE
LLU|FUN_026740-T1PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
LLU|FUN_026741-T1WD REPEAT AND HMG-BOX DNA BINDING PROTEIN
LLU|FUN_026742-T1
LLU|FUN_026743-T1
LLU|FUN_026744-T1WD REPEAT-CONTAINING PROTEIN 43
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