About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_026545-T1
LLU|FUN_026546-T1SOLUTE CARRIER FAMILY 2
LLU|FUN_026547-T1
LLU|FUN_026548-T1AGAP011099-PA
LLU|FUN_026549-T1CERAMIDE GLUCOSYLTRANSFERASE
LLU|FUN_026550-T1SH2-SH3 ADAPTOR PROTEIN-RELATED
LLU|FUN_026551-T1
LLU|FUN_026552-T1RAS GTPASE-ACTIVATING PROTEINS
LLU|FUN_026553-T1FUKUTIN RELATED PROTEIN
LLU|FUN_026554-T1ACYL-COA-BINDING PROTEIN, ACBP
LLU|FUN_026555-T1BLR2807 PROTEIN
LLU|FUN_026556-T1BLR2807 PROTEIN
LLU|FUN_026557-T1
LLU|FUN_026558-T1TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 2
LLU|FUN_026559-T1
LLU|FUN_026560-T1G KINASE ANCHORING PROTEIN 1
LLU|FUN_026561-T1FANCONI-ASSOCIATED NUCLEASE 1
LLU|FUN_026562-T1TRANSMEMBRANE PROTEIN 15-RELATED
LLU|FUN_026563-T1
LLU|FUN_026564-T1
LLU|FUN_026565-T1
LLU|FUN_026566-T1
LLU|FUN_026567-T1
LLU|FUN_026568-T1
LLU|FUN_026569-T1LD15586P
LLU|FUN_026570-T1RNA HELICASE
LLU|FUN_026571-T1FIDO DOMAIN-CONTAINING PROTEIN DDB_G0283145
LLU|FUN_026572-T1NG5
LLU|FUN_026573-T1
LLU|FUN_026574-T1
LLU|FUN_026575-T1
LLU|FUN_026576-T1PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1
LLU|FUN_026577-T1
LLU|FUN_026578-T1KINESIN-RELATED
LLU|FUN_026579-T1ARCHAEMETZINCIN
LLU|FUN_026580-T1FAM124 DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_026581-T1
LLU|FUN_026582-T1HORMA DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_026583-T1ROPPORIN-1-LIKE PROTEIN
LLU|FUN_026584-T1U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
LLU|FUN_026585-T1
LLU|FUN_026586-T1
LLU|FUN_026587-T1ANHYDRO-N-ACETYLMURAMIC ACID KINASE
LLU|FUN_026588-T1
LLU|FUN_026589-T1NETRIN RECEPTOR UNC5
LLU|FUN_026590-T1
LLU|FUN_026591-T1
LLU|FUN_026592-T1
LLU|FUN_026593-T1
LLU|FUN_026594-T1
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