About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_026495-T1
LLU|FUN_026496-T1CADHERIN-87A
LLU|FUN_026497-T1
LLU|FUN_026498-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_026499-T1
LLU|FUN_026500-T1
LLU|FUN_026501-T1MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
LLU|FUN_026502-T1MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
LLU|FUN_026503-T1MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
LLU|FUN_026504-T1ADP RIBOSYLATION FACTOR-RELATED
LLU|FUN_026505-T1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 3
LLU|FUN_026506-T1ADP RIBOSYLATION FACTOR-RELATED
LLU|FUN_026507-T1
LLU|FUN_026508-T1
LLU|FUN_026509-T1
LLU|FUN_026510-T1IMPORTIN-7, 8, 11
LLU|FUN_026511-T1RIBOPHORIN I
LLU|FUN_026512-T1ZINC FINGER PROTEIN RLF
LLU|FUN_026513-T1
LLU|FUN_026514-T1INTELECTIN
LLU|FUN_026515-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_026516-T1
LLU|FUN_026517-T1
LLU|FUN_026518-T1
LLU|FUN_026519-T1VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
LLU|FUN_026520-T1
LLU|FUN_026521-T1
LLU|FUN_026522-T1UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE
LLU|FUN_026523-T1
LLU|FUN_026524-T1AGAP008228-PA
LLU|FUN_026525-T1PROTEIN PHOSPHATASE
LLU|FUN_026526-T1KEREN-RELATED
LLU|FUN_026527-T1OS02G0815200 PROTEIN
LLU|FUN_026528-T1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
LLU|FUN_026529-T1
LLU|FUN_026530-T1ADIPOR/PROGESTIN RECEPTOR-RELATED
LLU|FUN_026531-T1
LLU|FUN_026532-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_026533-T1INOSITOL POLYPHOSPHATE KINASE
LLU|FUN_026534-T1RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
LLU|FUN_026535-T1E3 UBIQUITIN-PROTEIN LIGASE PRAJA
LLU|FUN_026536-T1BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2
LLU|FUN_026537-T1HISTONE H2A
LLU|FUN_026538-T1
LLU|FUN_026539-T1
LLU|FUN_026540-T1
LLU|FUN_026541-T1
LLU|FUN_026542-T1
LLU|FUN_026543-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_026544-T1
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