About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_026745-T1EQUILIBRATIVE NUCLEOSIDE TRANSPORTER
LLU|FUN_026746-T1D123 PROTEIN
LLU|FUN_026747-T1D123 PROTEIN
LLU|FUN_026748-T1
LLU|FUN_026749-T1
LLU|FUN_026750-T1
LLU|FUN_026751-T1
LLU|FUN_026752-T1PROTEIN TRANSPORT PROTEIN SEC23
LLU|FUN_026753-T1EG:114D9.1 PROTEIN-RELATED
LLU|FUN_026754-T1COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30
LLU|FUN_026755-T1GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE
LLU|FUN_026756-T1CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED
LLU|FUN_026757-T1
LLU|FUN_026758-T1
LLU|FUN_026759-T1
LLU|FUN_026760-T1E3 UBIQUITIN-PROTEIN LIGASE RNF8
LLU|FUN_026761-T1SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED
LLU|FUN_026762-T1UNCHARACTERIZED
LLU|FUN_026763-T1RIBOSOMAL PROTEIN S19P FAMILY MEMBER
LLU|FUN_026764-T14.1 G PROTEIN
LLU|FUN_026765-T1ZINC FINGER PROTEIN 532-RELATED
LLU|FUN_026766-T1
LLU|FUN_026767-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
LLU|FUN_026768-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
LLU|FUN_026769-T1
LLU|FUN_026770-T1
LLU|FUN_026771-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
LLU|FUN_026772-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
LLU|FUN_026773-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
LLU|FUN_026774-T1
LLU|FUN_026775-T1-
LLU|FUN_026776-T1
LLU|FUN_026777-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_026778-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_026779-T1
LLU|FUN_026780-T1GH08155P
LLU|FUN_026781-T1AGAP011099-PA
LLU|FUN_026782-T1CHITIN SYNTHASE
LLU|FUN_026783-T1
LLU|FUN_026784-T1AGAP011099-PA
LLU|FUN_026785-T1
LLU|FUN_026786-T1
LLU|FUN_026787-T1
LLU|FUN_026788-T1
LLU|FUN_026789-T1
LLU|FUN_026790-T1
LLU|FUN_026791-T1NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
LLU|FUN_026792-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_026793-T1
LLU|FUN_026794-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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