About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_024286-T1
OS493_024287-T1
OS493_024288-T1
OS493_024290-T1
OS493_024291-T1
OS493_024292-T1DNA HELICASE RECQ FAMILY MEMBER
OS493_024293-T1C2H2-TYPE DOMAIN-CONTAINING PROTEIN
OS493_024294-T1HEAT SHOCK 70 KDA PROTEIN 14
OS493_024295-T1
OS493_024296-T1
OS493_024297-T1
OS493_024298-T1EXPRESSED PROTEIN
OS493_024299-T1
OS493_024300-T1
OS493_024301-T1
OS493_024302-T1
OS493_024303-T1
OS493_024304-T1
OS493_024305-T1
OS493_024308-T1
OS493_024309-T1
OS493_024310-T1
OS493_024311-T1
OS493_024312-T1
OS493_024313-T1
OS493_024314-T1
OS493_024315-T1
OS493_024316-T1
OS493_024317-T1
OS493_024318-T1
OS493_024319-T1
OS493_024321-T1
OS493_024322-T1
OS493_024323-T1
OS493_024324-T1
OS493_024325-T1PROLINE-RICH, LACRIMAL 1
OS493_024326-T1PROLINE-RICH, LACRIMAL 1
OS493_024327-T1
OS493_024328-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
OS493_024329-T1OTU DOMAIN CONTAINING PROTEIN
OS493_024330-T1UNCHARACTERIZED
OS493_024331-T1UNCHARACTERIZED
OS493_024332-T1
OS493_024333-T1UNCHARACTERIZED
OS493_024334-T1GLUTATHIONE PEROXIDASE
OS493_024335-T1
OS493_024336-T1AQUAPORIN OR AQUAGLYCEROPORIN RELATED
OS493_024337-T1AQUAPORIN OR AQUAGLYCEROPORIN RELATED
OS493_024339-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
OS493_024340-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
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