About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_024072-T1
OS493_024073-T1BLR6086 PROTEIN
OS493_024074-T1BLR6086 PROTEIN
OS493_024075-T1INTERFERON ALPHA-INDUCIBLE PROTEIN 27
OS493_024076-T1INTERFERON ALPHA-INDUCIBLE PROTEIN 27
OS493_024077-T1
OS493_024078-T1SI:CH211-243P7.3-RELATED
OS493_024079-T1
OS493_024080-T1
OS493_024081-T1
OS493_024082-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_024083-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_024084-T1S -2-HYDROXY-ACID OXIDASE-RELATED
OS493_024085-T1
OS493_024086-T1UNNAMED PRODUCT
OS493_024087-T1UNCHARACTERIZED
OS493_024088-T1
OS493_024089-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_024090-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_024093-T1EXPRESSED PROTEIN
OS493_024094-T1
OS493_024095-T1
OS493_024096-T1
OS493_024097-T1
OS493_024098-T1
OS493_024099-T1
OS493_024100-T1TUMOR NECROSIS FACTOR FAMILY MEMBER
OS493_024101-T1
OS493_024102-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
OS493_024103-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
OS493_024104-T1INTERFERON ALPHA-INDUCIBLE PROTEIN 27
OS493_024106-T1BLR6086 PROTEIN
OS493_024107-T1BLR6086 PROTEIN
OS493_024108-T1BLR6086 PROTEIN
OS493_024109-T1
OS493_024110-T1SI:CH211-243P7.3-RELATED
OS493_024111-T1INTERFERON ALPHA-INDUCIBLE PROTEIN 27
OS493_024112-T1
OS493_024113-T1
OS493_024116-T1
OS493_024117-T1
OS493_024118-T1AMMECR1 HOMOLOG
OS493_024119-T1CARBONIC ANHYDRASE
OS493_024120-T1
OS493_024121-T1
OS493_024122-T1
OS493_024123-T1G PATCH DOMAIN-CONTAINING PROTEIN 1
OS493_024124-T1DYNEIN REGULATORY COMPLEX PROTEIN 9
OS493_024125-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_024128-T1
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