About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_024129-T1
OS493_024130-T1
OS493_024131-T1
OS493_024132-T1
OS493_024133-T1
OS493_024134-T1
OS493_024135-T1
OS493_024136-T1
OS493_024137-T1
OS493_024138-T1
OS493_024139-T1
OS493_024140-T1DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
OS493_024141-T1DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
OS493_024142-T1
OS493_024143-T1DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
OS493_024144-T1DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
OS493_024145-T1
OS493_024146-T1POTASSIUM CHANNEL, SUBFAMILY K
OS493_024148-T1SPHINGOLIPID LONG CHAIN BASE-RESPONSIVE PROTEIN PIL1
OS493_024149-T1DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
OS493_024150-T1UNCHARACTERIZED
OS493_024151-T1UNCHARACTERIZED
OS493_024152-T1UNCHARACTERIZED
OS493_024153-T1UNCHARACTERIZED
OS493_024154-T1
OS493_024155-T1UNCHARACTERIZED
OS493_024156-T1
OS493_024157-T1GLUTATHIONE REDUCTASE
OS493_024158-T1ANKYRIN REPEAT CONTAINING
OS493_024159-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
OS493_024160-T1
OS493_024161-T1
OS493_024162-T1RHOMBOID-RELATED PROTEIN
OS493_024163-T1SH2-SH3 ADAPTOR PROTEIN-RELATED
OS493_024164-T1FCH AND DOUBLE SH3 DOMAINS PROTEIN
OS493_024165-T1HOMEO BOX HB9 LIKE A-RELATED
OS493_024166-T1HOMEOBOX PROTEIN
OS493_024167-T1HOMEOBOX PROTEIN
OS493_024168-T1
OS493_024170-T1HOMEO BOX HB9 LIKE A-RELATED
OS493_024171-T1
OS493_024172-T1CHYMOTRYPSIN-RELATED
OS493_024173-T1CHYMOTRYPSIN-RELATED
OS493_024174-T1OPSIN
OS493_024175-T1CEH-10 HOMEODOMAIN-CONTAINING HOMOLOG
OS493_024176-T1BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR
OS493_024177-T1DIAMINE N-ACETYLTRANSFERASE
OS493_024178-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_024179-T1RIBOSOMAL PROTEIN L17
OS493_024180-T1RIBOSOMAL PROTEIN L17
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