About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_023861-T1
OS493_023862-T1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
OS493_023863-T1ARGINYL-TRNA SYNTHETASE
OS493_023864-T1
OS493_023865-T1CYTOSOLIC PHOSPHOLIPASE A2
OS493_023866-T1CYTOSOLIC PHOSPHOLIPASE A2
OS493_023867-T1
OS493_023868-T1
OS493_023869-T1-
OS493_023870-T1
OS493_023871-T1
OS493_023872-T1
OS493_023873-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_023874-T1MITOCHONDRIA-EATING PROTEIN-RELATED
OS493_023875-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_023876-T1
OS493_023877-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_023878-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_023879-T1MITOCHONDRIA-EATING PROTEIN-RELATED
OS493_023880-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_023881-T1
OS493_023882-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_023883-T1
OS493_023884-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
OS493_023885-T1DUAL SPECIFICITY PROTEIN KINASE
OS493_023886-T1DUAL SPECIFICITY PROTEIN KINASE
OS493_023887-T1GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD
OS493_023888-T1GTP-BINDING PROTEIN-RELATED
OS493_023889-T1
OS493_023890-T1
OS493_023891-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
OS493_023892-T1
OS493_023893-T1
OS493_023894-T1INTEGRAL TRANSMEMBRANE PROTEIN 2
OS493_023895-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
OS493_023896-T1EXPRESSED PROTEIN
OS493_023897-T1
OS493_023898-T1GASTROKINE 1
OS493_023899-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
OS493_023900-T1GASTROKINE 1
OS493_023901-T1DIHYDROXY-ACID DEHYDRATASE DAD
OS493_023902-T1DIHYDROXY-ACID DEHYDRATASE DAD
OS493_023903-T1
OS493_023904-T1SERINE PROTEASE
OS493_023906-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_023907-T1CONTACTIN 5
OS493_023908-T1G PATCH AND KOW-CONTAINING
OS493_023909-T1G PATCH AND KOW-CONTAINING
OS493_023910-T1COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4
OS493_023911-T1TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C
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