About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_023635-T1RIBONUCLEASE
OS493_023636-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_023637-T1
OS493_023638-T1
OS493_023639-T1DNA2/NAM7 HELICASE FAMILY
OS493_023640-T1RIBONUCLEASE
OS493_023641-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_023642-T1
OS493_023643-T1
OS493_023644-T1DNA2/NAM7 HELICASE FAMILY
OS493_023645-T1RIBONUCLEASE
OS493_023646-T1
OS493_023647-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_023649-T1
OS493_023650-T1
OS493_023651-T1MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
OS493_023652-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_023653-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_023654-T1DNA2/NAM7 HELICASE FAMILY
OS493_023655-T1
OS493_023656-T1RIBONUCLEASE
OS493_023657-T1
OS493_023658-T1MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
OS493_023659-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_023660-T1DNA2/NAM7 HELICASE FAMILY MEMBER
OS493_023661-T1DNA2/NAM7 HELICASE FAMILY
OS493_023662-T1
OS493_023663-T1
OS493_023664-T1
OS493_023665-T1PROTEIN TORNADO 1
OS493_023666-T1
OS493_023667-T1
OS493_023668-T1UNCHARACTERIZED
OS493_023669-T1
OS493_023670-T1
OS493_023671-T1
OS493_023672-T1
OS493_023673-T1
OS493_023676-T1
OS493_023677-T1
OS493_023678-T1
OS493_023679-T1
OS493_023680-T1
OS493_023681-T1
OS493_023682-T1
OS493_023683-T1PROTEIN TORNADO 1
OS493_023686-T1UPF0462 PROTEIN
OS493_023688-T1UPF0462 PROTEIN
OS493_023689-T1UPF0462 PROTEIN
OS493_023692-T1
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