About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_023475-T1NEUROLIGIN
OS493_023476-T1CARBOXYLESTERASE
OS493_023477-T1NEUROLIGIN
OS493_023478-T1NEUROLIGIN
OS493_023479-T1CARBOXYLESTERASE
OS493_023480-T1NEUROLIGIN
OS493_023481-T1NEUROLIGIN
OS493_023482-T1
OS493_023483-T1TETRASPANIN
OS493_023484-T1
OS493_023485-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
OS493_023486-T1PROPERDIN
OS493_023487-T1
OS493_023489-T126S PROTEASOME REGULATORY SUBUNIT
OS493_023490-T1AMINE OXIDASE
OS493_023491-T1AMINE OXIDASE
OS493_023492-T1
OS493_023493-T1
OS493_023494-T1MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
OS493_023495-T1FORMATE DEHYDROGENASE 1
OS493_023496-T1
OS493_023497-T1
OS493_023498-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 61
OS493_023499-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_023500-T1
OS493_023501-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_023502-T1PYRIDOXINE-5-PHOSPHATE OXIDASE
OS493_023503-T1CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P
OS493_023504-T1CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P
OS493_023505-T1
OS493_023506-T1MOLTING PROTEIN MLT-4
OS493_023507-T1OVOCHYMASE-RELATED
OS493_023508-T1F5/8 TYPE C DOMAIN-CONTAINING PROTEIN
OS493_023509-T1ACROSIN-RELATED
OS493_023510-T1
OS493_023511-T1SERINE PROTEASE
OS493_023512-T1
OS493_023513-T1GTPASE, IMAP FAMILY MEMBER-RELATED
OS493_023514-T1
OS493_023515-T1
OS493_023516-T1GTPASE, IMAP FAMILY MEMBER-RELATED
OS493_023517-T1GTPASE, IMAP FAMILY MEMBER-RELATED
OS493_023518-T1GTPASE, IMAP FAMILY MEMBER-RELATED
OS493_023519-T1PCD6 INTERACTING PROTEIN-RELATED
OS493_023520-T1
OS493_023521-T1ARGININE OR CREATINE KINASE
OS493_023522-T1STEROL O-ACYLTRANSFERASE
OS493_023523-T1
OS493_023524-T1LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
OS493_023525-T1VACUOLAR PROTON ATPASES
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